DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39b and gur-3

DIOPT Version :10

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_509743.2 Gene:gur-3 / 181245 WormBaseID:WBGene00001804 Length:447 Species:Caenorhabditis elegans


Alignment Length:263 Identity:51/263 - (19%)
Similarity:97/263 - (36%) Gaps:81/263 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 YVALSGSLLYFWSSLLSILIIR-------MQFVLVLLNVELLGHHVSLLGIRLQNVLECHLMGAN 196
            :|.|.|.:::..||.:|::.|.       :||.:..|..|::.....          ||.|.   
 Worm   212 FVILEGYVIFIASSCISLVAILFFQLCRILQFSIGQLIEEMVPKEKE----------ECPLP--- 263

  Fly   197 CTLDGNANRLCSLEFLLALKQSHMQLHYLFTHFNDL----------FGWSILGTY---------- 241
                               :||..|:|.:..|:.::          |.:|:..||          
 Worm   264 -------------------EQSLQQIHDVQIHYQEISNAKLYIEQNFSFSLFYTYGCCIPLTCLL 309

  Fly   242 -VVLFSDSTVNIYWTQQVLVEVYEYKYLYATFSVFVPSFFNILVFCRCGEFCQRQSVLIGSYLRN 305
             .:.|.:.      .|..:.|.:... ::.|.::.....|:|..|....|   ...:|..|:   
 Worm   310 GYIAFRNG------IQADMAETFSVA-IWLTNTMLALMLFSIPAFMIAEE---GDKLLTASF--- 361

  Fly   306 LSCHPSIGRETSYKDLL----MEFI-LQVEQNVLAINAEGFMSTDNSLLMSILAAKVTYLIVLMQ 365
            ...|.::..|   :|||    |.|: .|:....|.:.|..|...:..:::|:.:|..||.::|:|
 Worm   362 KMYHETLCEE---RDLLVLSQMSFLSFQMHATKLTLTAGNFFMMNRKIMISLFSAIFTYFLILVQ 423

  Fly   366 FSS 368
            |.:
 Worm   424 FDA 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:473258 50/260 (19%)
gur-3NP_509743.2 7tm_7 46..425 CDD:462463 50/260 (19%)

Return to query results.
Submit another query.