DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39b and Gr22d

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster


Alignment Length:394 Identity:79/394 - (20%)
Similarity:152/394 - (38%) Gaps:78/394 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLGLVPWSESCAQSKFVQKVY---------SAILIIL------NAVHFGISI-YFPQSAELFLSL 62
            |||:.|:.....:.:..:.::         |::||::      :..| ||.: .|.::|.|:   
  Fly    26 LLGIFPFKYEPKKRRLRRSMWLILFGVVISSSLLILMVKQSAEDREH-GIMLDVFQRNALLY--- 86

  Fly    63 MVNVIVFVARIVCVTVIILQVM---VHYDDYFR--FCREMKYLGLRLQCELKIHVGRLKWQSYAK 122
            .::.::.|..:|.:..:.|:.:   .|.::.:.  ...|.||.     |...:...........|
  Fly    87 QISSLMGVVGVVSICTVHLRTLWRSKHLEEIYNGLMLLEAKYF-----CSNAVECPAFDGYVIQK 146

  Fly   123 ILALGIGFLVTVLPSIYVALSGSLLYFWSSLLSILIIRMQFVLVLLNVELLGHHVSLLGI----R 183
            .:.:.:|.|...:  ::..:..|.|    .:|::|::.|    |.|...||..|.. ||:    |
  Fly   147 GVVIVVGLLAPWM--VHFGMPDSKL----PVLNVLVVSM----VKLGTLLLALHYH-LGVVIIYR 200

  Fly   184 LQNVLECHLMGANCTLDGNANRLCS-LEFLLALKQSHMQLHYLFTHFNDLFG-WSILGTYVVLFS 246
            ...::...|:...|:|.||.....| :.|||.|   :.:|..|::...|.:. .::|...:.|.:
  Fly   201 FVWLINRELLSLVCSLRGNHKGSSSRVRFLLKL---YNKLVNLYSKLADCYDCQTVLMMAIFLAA 262

  Fly   247 DSTVNIYWTQQVLVEVYEYKYLYATFSVFVPSF-----FNILVFCRCGEFCQ------RQSVLIG 300
            :..|..|      :.||.......:|.|.:..|     .|.:.|....:.|.      ||:.:|.
  Fly   263 NIIVCFY------MIVYRISLSKMSFFVMLIMFPLAIANNFMDFWLSMKVCDLLQKTGRQTSMIL 321

  Fly   301 SYLRNLSCHPSIGRETSYKDL---LMEFILQVEQNVLAINAEGFMSTDNSLLMSILAAKVTYLIV 362
            ....::        |...|||   :.:|.|............|....:..:...:..|.|.||:.
  Fly   322 KLFNDI--------ENMDKDLEISISDFALYCSHRRFKFLHCGLFHVNREMGFKMFVASVLYLLY 378

  Fly   363 LMQF 366
            |:||
  Fly   379 LVQF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 79/394 (20%)
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 79/394 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.