DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39b and Gr22f

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_722729.2 Gene:Gr22f / 117349 FlyBaseID:FBgn0041249 Length:378 Species:Drosophila melanogaster


Alignment Length:378 Identity:69/378 - (18%)
Similarity:128/378 - (33%) Gaps:123/378 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QSKFVQKVYSAILIILNAVHFGISIYFPQSAELFLSLM--------------------------- 63
            ::..::|:|         :.|.::.:|..|..|.:::.                           
  Fly    82 RNPLLEKIY---------MQFQVTTFFTISVLLLMNVWKSNTVRKIANELLTLEGQVKDLLTLKN 137

  Fly    64 ---VNVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKIHVGRLKWQSYAKILA 125
               .|..|....:..:...::.:      ||..|:|                     .||.|||.
  Fly   138 CPNFNCFVIKKHVAAIGQFVISI------YFCLCQE---------------------NSYPKILK 175

  Fly   126 LGIGFLVTVLPSIYVALSGSLLYFWSSLLSILIIRMQFVLVLLNVELLGHHVSLLGIRLQNVLEC 190
                 ::..|||  |.|...:::|.:.:  ||:.|..:   |:|..|...|              
  Fly   176 -----ILCCLPS--VGLQLIIMHFHTEI--ILVYRYVW---LVNETLEDSH-------------- 214

  Fly   191 HLMGANCTLDGNANRLCSLEFLLALKQSHMQLHYLFTHFNDLFGWSILGTYVVLFSDSTVNIYWT 255
            ||..:.            :..|.:|....::|..|....|||   .::...::....:||.|::.
  Fly   215 HLSSSR------------IHALASLYDRLLKLSELVVACNDL---QLILMLIIYLIGNTVQIFFL 264

  Fly   256 QQVLVEVYE-YKYLYATFSVFVP--SFFNILVFC----RCGEFCQRQSVLIGSYLRNLSCHPSIG 313
            ..:.|.:.: |.||.|:..:.:.  .|:..:|.|    :||:  |...||  ....:|. |....
  Fly   265 IVLGVSMNKRYIYLVASPQLIINFWDFWLNIVVCDLAGKCGD--QTSKVL--KLFTDLE-HDDEE 324

  Fly   314 RETSYKDLLMEFILQVEQNVLAINAEGFMSTDNSLLMSILAAKVTYLIVLMQF 366
            .|.|    |.||..............|..|.::::...::.....||:.|:||
  Fly   325 LERS----LNEFAWLCTHRKFRFQLCGLFSINHNMGFQMIITSFLYLVYLLQF 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 69/378 (18%)
Gr22fNP_722729.2 7tm_7 19..377 CDD:285581 69/378 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.