DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr39b and Gr39a

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster


Alignment Length:440 Identity:80/440 - (18%)
Similarity:153/440 - (34%) Gaps:146/440 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FHP-----YLKYFALLGLVPWSESCAQSKFVQKVYSAILIILNAVHFGISIYFPQSAELFLSLMV 64
            |.|     |.:....||:.....:..:.||  ::..::|..:  |||.:..|.            
  Fly     3 FQPGELCAYYRLCRYLGIFCIDYNPTKKKF--RLRRSVLCYI--VHFALQAYL------------ 51

  Fly    65 NVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKI---HVGRLKWQSYAKILAL 126
                    :.|::|::        .|:|.|         .:.||..   |..||       ::.:
  Fly    52 --------VGCISVMV--------TYWRRC---------FKSELTTTGNHFDRL-------VMVI 84

  Fly   127 GIGFLVTV------LPSIYVALSGSLLYFWSSLLS----ILIIRMQFVLVLLNVELLGHH----- 176
            .:|.||..      |.:.::.:...:.::..:.|:    :|..|:.::::..||..:.:.     
  Fly    85 ALGILVVQNAWLIWLQAPHLRIVRQIEFYRRNHLANVRLLLPKRLLWLIIATNVVYMANFIKTCI 149

  Fly   177 ------------VSLLGIRLQNVLECHLMGA-------------------NCTLDGNAN------ 204
                        ::.||..|:.::....||.                   |..:|.:|:      
  Fly   150 FEWLTDASRLFVITSLGFPLRYLVTSFTMGTYFCMVHIVRLVLDWNQSQINAIIDESADLKMTSP 214

  Fly   205 -----RLCSLEF---LLALKQSHMQLHYLFTHFNDLFGWSILGTYVVLFSDSTVNIYWTQQ---- 257
                 |:| ||.   |:.|....:.|.|.|      ..|.   :::....|.|..||.|..    
  Fly   215 NRLRLRVC-LEMHDRLMLLCNDEISLVYGF------IAWL---SWMFASLDVTGVIYLTMVIQTK 269

  Fly   258 ---VLVEVYEYKYLYATFSVFVPSFFNILVFCRCGEFCQRQSVLIGSYLRNLSCHPSIGRETSYK 319
               ||..:....:|..||.....||.:           .|.::......:.|:..|..|  |...
  Fly   270 KSIVLKLITNVVWLSPTFMTCAASFMS-----------NRVTIQANKTAKMLTKVPRTG--TGLD 321

  Fly   320 DLLMEFILQVEQNVLAINAEGFMSTDNSLLMSILAAKVTYLIVLMQFSSV 369
            .::.:|:|:..:....:.|.||.:.|.|.|..:..|..||:::|:||..:
  Fly   322 RMIEKFLLKNLRQKPILTAYGFFALDKSTLFKLFTAIFTYMVILVQFKEM 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 79/436 (18%)
Gr39aNP_724330.1 7tm_7 8..372 CDD:285581 78/435 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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