DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr39b and Gr59d

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_611758.2 Gene:Gr59d / 117343 FlyBaseID:FBgn0041236 Length:390 Species:Drosophila melanogaster


Alignment Length:418 Identity:80/418 - (19%)
Similarity:152/418 - (36%) Gaps:126/418 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LYSFHPYLKYFALLGLVPWSESCAQSKFVQKVYSAILIIL----NAVHFGISIYFPQSAELFLSL 62
            |.|...:|..||||             ..|.:..:::.::    |::|          ..:||  
  Fly    41 LISVSTHLLIFALL-------------LYQTMRKSVVNVMWKYANSLH----------EYVFL-- 80

  Fly    63 MVNVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLR----LQCELKIHVGRLKWQSYAKI 123
                ::...|:|||.:.::........:.|.....:.|..|    :|              |.:.
  Fly    81 ----VIAGFRVVCVFLELVSRWSQRRTFVRLFNSFRRLYQRNPDIIQ--------------YCRR 127

  Fly   124 LALGIGFLVTVLPSIYVALSGSLLYFWSSLLSI-LIIRMQFVL---VLLNVELLGHHVSLLGIR- 183
            ..:...|.||:..::::.::   |....:.||| |.:|:..||   .::||.:..::|:...:| 
  Fly   128 SIVSKFFCVTMTETLHIIVT---LAMMRNRLSIALALRIWAVLSLTAIINVIITQYYVATACVRG 189

  Fly   184 ---LQN------VLECHLMGAN---------CTLDGNANRLCSLEFLLALKQSHMQ--LHYLFTH 228
               |.|      |.|...:..|         |.|.....|       :|..||.:|  :..|.|.
  Fly   190 RYALLNKDLQAIVTESQSLVPNGGGVFVTKCCYLADRLER-------IAKSQSDLQELVENLSTA 247

  Fly   229 FND-------LFGWSILGTYVVLFSDSTVNIYWTQQVLVEVYEYKYLYATFSVFVPSFFNIL-VF 285
            :..       .:..::|||..:|||.|....: ...:||.:.....:|..|.| |..:.|.. ||
  Fly   248 YEGEVVCLVITYYLNMLGTSYLLFSISKYGNF-GNNLLVIITLCGIVYFVFYV-VDCWINAFNVF 310

  Fly   286 CRCGEFCQRQSVLIGSYLRNLSCHPS----IGRETSYK-------DLLME-FILQVEQNVLAINA 338
                            ||  |..|..    :.:.|.::       :::.| |.|.:.:|.|.::.
  Fly   311 ----------------YL--LDAHDKMVKLLNKRTLFQPGLDHRLEMVFENFALNLVRNPLKLHM 357

  Fly   339 EGFMSTDNSLLMSILAAKVTYLIVLMQF 366
            .|..........::..:.:|:.::|:|:
  Fly   358 YGLFEFGRGTSFAVFNSLLTHSLLLIQY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 78/415 (19%)
Gr59dNP_611758.2 7tm_7 9..389 CDD:285581 80/418 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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