DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr39b and Gr98c

DIOPT Version :9

Sequence 1:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:401 Identity:93/401 - (23%)
Similarity:167/401 - (41%) Gaps:55/401 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLYSFHPYLKYFALLGLVPWSESCAQS-----KFVQKV-YSAILIIL----------NAVHFGIS 49
            :|.:..|||:..:|.||.|.:|...::     :|.... ||..||.:          |.|...:.
  Fly    10 LLTTARPYLQVLSLFGLTPPAEFFTRTLRKRRRFCWMAGYSLYLIAILLMVFYEFHANIVSLHLE 74

  Fly    50 IYFPQSAELFLSLMVNVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKIHVGR 114
            || ....|.|..:|.....|:. :...|...|.::::|........|:..|.|.:....|...|:
  Fly    75 IY-KFHVEDFSKVMGRTQKFLI-VAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGK 137

  Fly   115 LKWQSYAKILALGIG----FLVTVLPSIYVALSGSLLYFWSSLLS-ILIIRMQF------VLVLL 168
            ..|.|:...|.|.||    .::.|:|.:.:..:|...::.:.:|: |::|.:|.      :.|||
  Fly   138 SHWWSFRLRLTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVNQVLTQIILIMLQLKGPEYCLFVLL 202

  Fly   169 NVELLGHHVSLLGIRLQNVLE---CHLMGANCTLDGNANRLCSLEFLLALKQSHMQLHYLFTHFN 230
            ..||:        :|.::|||   ..|...:|  ......||     :.|||:.:.:..::...:
  Fly   203 VYELI--------LRTRHVLEQLKDDLEDFDC--GARIQELC-----VTLKQNQLLIGRIWRLVD 252

  Fly   231 DL---FGWSILGTYVVLFSDSTV--NIYWTQQVLVEVYEYKYLYATFSVFVPSFFNILVFCRCGE 290
            ::   |.||:  |.:.|::..|:  .:.|.....::..:...|....|:...| ||:|:.|...|
  Fly   253 EIGAYFRWSM--TLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLS-FNLLLTCFFSE 314

  Fly   291 FCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINAEGFMSTDNSLLMSILAA 355
            .|.:....|...|..:.|.|:.......|..|.|:|||::...|.....|....:..|...:|..
  Fly   315 CCVKTYNSISYILHQIGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFDINIKLFGGMLVT 379

  Fly   356 KVTYLIVLMQF 366
            ...|:|:::||
  Fly   380 LCGYVIIIVQF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 92/397 (23%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 92/396 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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