DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39a and Gr43a

DIOPT Version :10

Sequence 1:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:368 Identity:65/368 - (17%)
Similarity:115/368 - (31%) Gaps:136/368 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YIVHFALQAYLVGC-ISVMVTYWRRCFKSELTTTGNHFDRLVMVIALGILVVQNAWLIWLQAPHL 104
            ||..::|...|.|. :::..|.:         ..|..|.||..:::...|...||... ::...:
  Fly   179 YIPFYSLYFILTGLQVNIANTAY---------GLGRRFGRLNRMLSSSFLAENNATSA-IKPQKV 233

  Fly   105 RIVRQIEFYR------------------------------RNHLANVRLLLPKRLLWLIIATNVV 139
            ..|:.:...|                              |:.:.||.||            .:.
  Fly   234 STVKNVSVNRPAMPSALHASLTKLNGETLPSEAAGDKAAARSLILNVELL------------KLG 286

  Fly   140 YMANFIKTCIFEWLTDASRLFVITSLGFPLRYLVTSFTMGTYF----CMVHIVR----LVLDWNQ 196
            |.....|..:.:.|.|:..     |||..:..|..||.:...|    |::|:|.    |.|:   
  Fly   287 YFPAKNKGLLLKSLADSHE-----SLGKCVHLLSNSFGIAVLFILVSCLLHLVATAYFLFLE--- 343

  Fly   197 SQINAIIDESADLKMTSPNRLRLRVCLEMHDRLMLLCNDEISLVYGFIAWLSWMFASLDVTGVIY 261
                                              ||...:...::..:.|:.:.|        :.
  Fly   344 ----------------------------------LLSKRDNGYLWVQMLWICFHF--------LR 366

  Fly   262 LTMVIQTKKSIVLKLITNVVWLSPTFMTCAASFMSNRVTIQANKTAKMLTKVPRTGTGLDRMIEK 326
            |.||::                     .|..:...:|.|||.....:.....|.    |...::|
  Fly   367 LLMVVE---------------------PCHLAARESRKTIQIVCEIERKVHEPI----LAEAVKK 406

  Fly   327 FLLKNLRQKPILTAYGFFALDKSTLFKLFTAIFTYMVILVQFK 369
            |..:.|......:|.|...::::.|....:||.||:|||:||:
  Fly   407 FWQQLLVVDADFSACGLCRVNRTILTSFASAIATYLVILIQFQ 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39aNP_724330.1 7tm_7 8..372 CDD:462463 65/368 (18%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:462463 64/366 (17%)

Return to query results.
Submit another query.