DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr39a and Gr23a

DIOPT Version :9

Sequence 1:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_787965.1 Gene:Gr23a / 33453 FlyBaseID:FBgn0041248 Length:374 Species:Drosophila melanogaster


Alignment Length:430 Identity:86/430 - (20%)
Similarity:149/430 - (34%) Gaps:141/430 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YNPTKKKFRLRRSVLCYIVHFALQAYLVGCISVMVTYWRRCFKSELTTTGNHFDRLVMVIA-LGI 88
            :.||:.:...|  |:..|.||.|.|:                    :.......|||:.:. || 
  Fly     2 FPPTRVQASSR--VVLKIFHFILVAF--------------------SLRSRRLSRLVLWLQFLG- 43

  Fly    89 LVVQNAWLIWLQAPHLRIVRQIEFYRRNHLANVRLLLPKRLLWLIIATNVVYMANFIKTCIFE-- 151
                  ||.|.    :.:..|...|.:    .:...|...|..::.....|..|..:.|...:  
  Fly    44 ------WLTWF----ISMWTQSVIYAQ----TIDCTLDCSLRHILTFFQTVSHAFIVVTSFLDGF 94

  Fly   152 ------------------WLTDASRLFVITSLGFPLRYLVTS------FTMGTYF---------C 183
                              ||.......::.:||  :.|||.|      |.:..|.         .
  Fly    95 RIKQDQLDEPIAFEDSDPWLAFTVLAMLVPTLG--VEYLVCSNAPEYAFRIRIYHLKTLPSFLAL 157

  Fly   184 MVHIVRLVLD-------------------------WNQ-SQINAIIDESA----DLK--MTSPNR 216
            .|.|:..:|:                         |.| .|.....|:.|    |||  ....:.
  Fly   158 QVQIISFILEVMKVNIRVRQTKLQLLILARELSCRWPQRKQKPQFSDQQAHRVKDLKRRYNDLHY 222

  Fly   217 LRLRVCLEMHDRLMLLCNDEISLVYGFIAWLS---WMFASLDVTGVIYLTMVIQTKK----SIVL 274
            |.:|:.......|:.:      ::..|..::|   |:|..            |:|:.    :|:|
  Fly   223 LFVRINGYFGGSLLTI------IIVHFAIFVSNSYWLFVD------------IRTRPWRIYAILL 269

  Fly   275 KL--ITNV-VWLSPTFMTCAASF-MSNRVTIQANKTAKMLTKVPRTGTGLDRMIEKFLLKNLRQK 335
            .|  |.|| :.::.....|..|: :..::....:|..|     |:.....:.::.:|.|:.|.|:
  Fly   270 NLGFIFNVALQMAAACWHCQQSYNLGRQIGCLISKLVK-----PQGSKLYNDLVSEFSLQTLHQR 329

  Fly   336 PILTAYGFFALDKSTLFKLFTAIFTYMVILVQFKEMENST 375
            .::||..||:|:...|..:|.|:.||:|||:||...|.|:
  Fly   330 FVVTAKDFFSLNLHLLSSMFAAVVTYLVILIQFMFAERSS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39aNP_724330.1 7tm_7 8..372 CDD:285581 84/425 (20%)
Gr23aNP_787965.1 7tm_7 <141..362 CDD:285581 50/243 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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