DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39a and Gr36c

DIOPT Version :9

Sequence 1:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_724040.1 Gene:Gr36c / 117486 FlyBaseID:FBgn0045485 Length:390 Species:Drosophila melanogaster


Alignment Length:430 Identity:88/430 - (20%)
Similarity:166/430 - (38%) Gaps:107/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFQPGELCAYYRLCRYLGI--FCIDYNPTKKKFRLRRSVLCYIVHFALQAYLVGCISVMVTY-W 62
            ||.:...|.|.|....::|:  |..|:| |.:.|..:.|.|..|.       |..||..:..| |
  Fly     1 MDLESFLLGAVYYYGLFIGLSNFEFDWN-TGRVFTKKWSTLYAIA-------LDSCIFALYIYHW 57

  Fly    63 RRCFKSELTTTGNH------FDR------LVMVIALGILVVQNAWLIWLQAPHLRIVRQIEFYRR 115
                      |||.      |.|      .|:.|..|:.:|...:.:.|:           :|:|
  Fly    58 ----------TGNTNIVNAIFGRANMLHEYVVAILTGLRIVTGLFTLILR-----------WYQR 101

  Fly   116 NHLANVRLLLPKRLLWLIIATNVV--YMA----------NFIKTCIFEWLTDASRLFVITS---- 164
            ..:.:             :|:.||  |:|          ..:...||..:||..::.::.|    
  Fly   102 CKMMD-------------LASKVVRMYVARPQVRRMSRWGILTKFIFGSITDGLQMAMVLSAMGS 153

  Fly   165 ------LGFPLRY---LVTSFTMGTYFCMVHIVRLVLDWNQSQINAIIDESADLKMTSPNR--LR 218
                  ||..|:|   ::.:..|.....::..||.......:::..:|||:.|| :.||..  :.
  Fly   154 VDSQFYLGLGLQYWMFVILNMAMMQQHMIMLFVRTQFQLINTELRQVIDEAKDL-LLSPRHQGVF 217

  Fly   219 LRVCLEMHDRLMLLCN---------DEISLVYGFIAWLSWMFASLDVTGVIYLTMVI--QTKKSI 272
            :..|..:.|::..:..         :::..|:|....:::....|...|..||...|  ...:::
  Fly   218 MTKCCSLADQIENIARIQSQLQTIMNQMEEVFGIQGAMTYGGYYLSSVGTCYLAYSILKHGYENL 282

  Fly   273 VLKLITNVVWLSPTFMTCAASFMSNRVTIQAN----KTAKMLTKVPRT-GTGLD-RMIEKFLLKN 331
            .:.|.|.::..|..|.......::..|.:...    :..::|.|  || ..||| |:.|.|...|
  Fly   283 SMTLSTVILAYSWCFFYYLDGMLNLSVMLHVQDDYWEMLQILGK--RTIFVGLDVRLEEAFENLN 345

  Fly   332 LR--QKPI-LTAYGFFALDKSTLFKLFTAIFTYMVILVQF 368
            |:  :.|: :|....:.:.:|....:|..:.|:.:.|:|:
  Fly   346 LQLIRNPLKITVVKLYDVTRSNTMAMFGNLITHSIFLIQY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39aNP_724330.1 7tm_7 8..372 CDD:285581 86/423 (20%)
Gr36cNP_724040.1 7tm_7 8..389 CDD:285581 86/423 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.