DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr39a and Gr93b

DIOPT Version :9

Sequence 1:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_732664.2 Gene:Gr93b / 117472 FlyBaseID:FBgn0045470 Length:395 Species:Drosophila melanogaster


Alignment Length:426 Identity:88/426 - (20%)
Similarity:155/426 - (36%) Gaps:132/426 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLCRYLGIF--CIDYNPTKKKFRL----RRSVL--CYIVHFA--------------------LQA 49
            |.|...|.|  .|.:...:|..:|    ||..|  |.::...                    |:|
  Fly    25 RSCFLYGTFFGVITFRIERKDSQLVAINRRGYLWICLVIRLLASCFYGYSYDAWSGQYEDMYLRA 89

  Fly    50 Y----LVGCI--SVMVTYWRRCFKSELTTTGNHFDRLVMVIALGILVVQNAWLIWLQAPHLRIVR 108
            :    |:||:  ||::...:..|..||....|.|.:|                            
  Fly    90 FFGFRLIGCLICSVIILVMQFWFGEELINLVNRFLQL---------------------------- 126

  Fly   109 QIEFYRRNHLANVRLLLPK-----RLLWLIIATNV-----VYMANFIKTCIFEW--LTDASRLFV 161
               |.|...|.|    .||     |..:|::.:.|     |:||  .:..:..|  ||....|:.
  Fly   127 ---FRRMQSLTN----SPKNRFGDRAEFLLMFSKVFSLLFVFMA--FRLMLSPWFLLTLVCDLYT 182

  Fly   162 ITSLGFPLRYLVTSFTMGTYFCMV---HIVRLVLDWN-------QSQINAIIDESADLKMTSPNR 216
            ....|           |.|:.|.|   .|..|..|.|       ::|:.::..|:...: .:|..
  Fly   183 SVGTG-----------MITHLCFVGYLSIGVLYRDLNNYVDCQLRAQLRSLNGENNSFR-NNPQP 235

  Fly   217 LR-----LRVCLEMHDRLMLLCNDEISLVYGFIAWLSWMFASLDVTGVIYLTMVIQTKKS----- 271
            .|     |..||.::|.:..: :.....::....:|| :..||....::....:::.:.|     
  Fly   236 TRQAISNLDKCLYLYDEIHQV-SRSFQQLFDLPLFLS-LAQSLLAMSMVSYHAILRRQYSFNLWG 298

  Fly   272 IVLKLITNVVWLSPTFMTCAASFMSNRVTIQANKTAKMLT---KVPRTGTGLDRMIEKFLLKNLR 333
            :|:||:.:||.|:          ||....:..::..:.|:   ..........:.:|.||.:...
  Fly   299 LVIKLLIDVVLLT----------MSVHSAVNGSRLIRRLSFENFYVTDSQSYHQKLELFLGRLQH 353

  Fly   334 QKPILTAYGFFAL-DKSTLFKLFTAIFTYMVILVQF 368
            |:..:...|.|.: ::.|||.| :|:.||:|.|||:
  Fly   354 QELRVFPLGLFEVSNELTLFFL-SAMVTYLVFLVQY 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr39aNP_724330.1 7tm_7 8..372 CDD:285581 88/426 (21%)
Gr93bNP_732664.2 7tm_7 24..391 CDD:285581 88/426 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.