DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58a and Gr33a

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_525102.4 Gene:Gr33a / 34641 FlyBaseID:FBgn0032416 Length:475 Species:Drosophila melanogaster


Alignment Length:485 Identity:91/485 - (18%)
Similarity:178/485 - (36%) Gaps:120/485 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLKFMYIYGIGCGLMPAPLKKGQ--FLLGYKQRWY--LIYTACLHGGLLTVLPFTFPHYMYDDSY 62
            :::.|..:.:..||:|...::.:  |:|.|.....  :.|.||.   ||..|.......:.|   
  Fly     1 MIQIMNWFSMVIGLIPLNRQQSETNFILDYAMMCIVPIFYVACY---LLINLSHIIGLCLLD--- 59

  Fly    63 MSSNPVLKWTFNLTNITRIMAMFSGVLLMWFRRKRI-------LNLGENLILHCLKCKTLDN--- 117
             |.|.|.|.:.:|..........:..||..:|||..       ||..:.:|..|.:...:|.   
  Fly    60 -SCNSVCKLSSHLFMHLGAFLYLTITLLSLYRRKEFFQQFDARLNDIDAVIQKCQRVAEMDKVKV 123

  Fly   118 RSKKYS----------------KLRKRVR-------NVLFQMLLVANLSILLGALI----LFRIH 155
            .:.|:|                .|...||       |:.|...:|::...|.|::|    ::.:.
  Fly   124 TAVKHSVAYHFTWLFLFCVFTFALYYDVRSLYLTFGNLAFIPFMVSSFPYLAGSIIQGEFIYHVS 188

  Fly   156 SV-QRISKTAMIVAHITQFIYVVFMMTGICVILLVLHWQSERLQIA------------------- 200
            .: ||..:..|::..|.|  ........:.|..:....:.||..:.                   
  Fly   189 VISQRFEQINMLLEKINQ--EARHRHAPLTVFDIESEGKKERKTVTPITVMDGRTTTGFGNENKF 251

  Fly   201 ---LK-----------DLCSFLNHEE----RNSLTLSENKANRSLGKLAKLFKLFAENQRLVREV 247
               :|           ||.:..:.:|    .::.|::||..|.|...|..||||  .::.|...|
  Fly   252 AGEMKRQEGQQKNDDDDLDTSNDEDEDDFDYDNATIAENTGNTSEANLPDLFKL--HDKILALSV 314

  Fly   248 FRTFD-----LP--IALLLLKMF----VTNVNLVYHGVQFGNDTIETSSYTRIVGQWVVISHYWS 301
            ....:     :|  .|..::.:|    .|.||.:..|   .:..::..:|..::..:..:...:.
  Fly   315 ITNGEFGPQCVPYMAACFVVSIFGIFLETKVNFIVGG---KSRLLDYMTYLYVIWSFTTMMVAYI 376

  Fly   302 AVLLMNVVDDVTRRSDLKMGDLLREFSHLELVKRDFHLQLELFSDHLRCHPSTYKVC-GLFIFNK 365
            .:.|....::.:::|.:.:.:::::       |..|.|..:||.:.::.....:... |.|.||.
  Fly   377 VLRLCCNANNHSKQSAMIVHEIMQK-------KPAFMLSNDLFYNKMKSFTLQFLHWEGFFQFNG 434

  Fly   366 QTSLAY---FFYVLVQ-----VLVLVQFDL 387
            ....|.   |.:..|.     ::||:|||:
  Fly   435 VGLFALDYTFIFSTVSAATSYLIVLLQFDM 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 84/463 (18%)
Gr33aNP_525102.4 7tm_7 <289..465 CDD:303125 38/188 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.