DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr58a and lite-1

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:358 Identity:73/358 - (20%)
Similarity:140/358 - (39%) Gaps:76/358 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 NLTNITRIMAMFSGVL----LMWFRRKRILNLGENLILHCLKCK-TLDNRSKKYSKLRKRVRNVL 133
            ::..:...:.|.||:|    |.....||:..|.       :.|: :|:.|:|:..:.        
 Worm   114 SMITLCNALIMLSGLLASLQLYTLGAKRLKPLK-------ILCQFSLNVRTKQAERR-------- 163

  Fly   134 FQMLLVANLSILLGALILFRIHSVQRISKTAMIVAHI------TQFI-------YVVFMMTGICV 185
             |.::...|::..|.|.| .:.:...:||...|:..:      |:.|       |.:|:......
 Worm   164 -QFMINTFLAVFSGLLAL-TMAATYAMSKWGYILYIVGTPNLDTETIFCVLLDSYALFVSRAAIS 226

  Fly   186 ILLVLHWQ-SERLQIALKDLCSFLNHEERNSLTLSENKANRSLGKL-------AKLFKLFAENQR 242
            .|.:|.:| ...::.::|.|.:.:...|::...|.|:    ||.|:       .::|     |.:
 Worm   227 ALAILFYQHCSVIRRSIKHLINEMVPAEQDECPLPES----SLQKIHDCQISYQRIF-----NGK 282

  Fly   243 LVREVFRTFDL--------PIALLLLKMFVTNVNLVYHGVQFGNDTIETSSYTRIVGQWVVISHY 299
            .|.|.:.:|.|        ||...|:.:.::..::.:..|        .|....||...:|:..:
 Worm   283 AVIEEYYSFVLFYSYGVCIPIFCFLMFVGMSAQSICWSEV--------VSIVIWIVNAILVLLLF 339

  Fly   300 WSAVLLMNVVDDVTRRSDLKMGDLLREFSHLELVKRDFHL--QLELFSDHLRCHPSTYKVCGLFI 362
            .....::|...|....|..:|   ..|..|.|   ||..:  |:..|:..:.....|...|..|.
 Worm   340 SLPAFMINEDGDRLVASSFRM---YHETFHEE---RDLTVLSQMTFFTFQIHSTKLTLSACNYFY 398

  Fly   363 FNKQTSLAYFFYVLVQVLVLVQFDLKNKVEKRN 395
            .::...|:.|..:|...|:|.:||:||....:|
 Worm   399 MDRSILLSLFSAILTYFLILWEFDIKNNQSLQN 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 64/334 (19%)
lite-1NP_509043.3 7tm_7 75..425 CDD:285581 70/350 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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