DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58a and Gr22b

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001014456.1 Gene:Gr22b / 117492 FlyBaseID:FBgn0045500 Length:386 Species:Drosophila melanogaster


Alignment Length:423 Identity:86/423 - (20%)
Similarity:150/423 - (35%) Gaps:132/423 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LHGG-LLTVLPFTFPHYMYDDSYMSSNPVLKWTFNLTNITRIMAMFSGVLLMWFRRKRILNLGEN 104
            |:|. ||.:.|||                               :.||..:...||.|.|.| ..
  Fly    21 LYGSWLLGIFPFT-------------------------------LDSGKRIRQLRRSRCLTL-YG 53

  Fly   105 LILHCLKCKTLDNRSKKY--SKLRKRVRNVLFQML-LVANLSILLGALILFRIHSVQ-------- 158
            |:|:.....||...:.:|  .||....||.:.:|: :|..:..:|.|||   :|.:.        
  Fly    54 LVLNYFLIFTLIRLAFEYRKHKLEAFKRNPVLEMINVVIGIINVLSALI---VHFMNFWGSRKVG 115

  Fly   159 ----------------------------RISKTAMIVAHITQFIYVVFMMTG----ICVILL--- 188
                                        .|.|...|:..:..|..:.|.:.|    ||::||   
  Fly   116 EICNELLILEYQDFEGLNGRNCPNFNCFVIQKCLTILGQLLSFFTLNFALPGLEFHICLVLLSCL 180

  Fly   189 --------VLHWQSERLQI---------ALKDLCSFLNHEERNSLTLSENKANRSLGKLAKLFKL 236
                    ::|:....|.|         .||||.|        .|.|:.......:.:...|:|.
  Fly   181 MEFSLNLNIMHYHVGVLLIYRYVWLINEQLKDLVS--------QLKLNPETDFSRIHQFLSLYKR 237

  Fly   237 FAENQRLVREVFRTFDLPIALLLLKMFVTNVNLVYHGVQFGNDTIETSSYTRIVGQWVVISHYWS 301
            ..|   |.|::...::..:.|.::.....|:.::|..:.:|   :...:|:       :....:.
  Fly   238 LLE---LNRKLVIAYEYQMTLFIIAQLSGNIVVIYFLIVYG---LSMRTYS-------IFLVAFP 289

  Fly   302 AVLLMNVVD--------DVTRRSDLKMGDLLREFSHLELVKRDFHLQLELFSDHLRC--HPSTYK 356
            ..||:|:.|        |:|.::..:...:|:.||.||  .||..|::.:......|  ....::
  Fly   290 NSLLINIWDFWLCIAACDLTEKAGDETAIILKIFSDLE--HRDDKLEMSVNEFAWLCSHRKFRFQ 352

  Fly   357 VCGLFIFNKQTSLAYFFYVLVQVLVLVQFDLKN 389
            :||||..|.:..........:.::.|||||..|
  Fly   353 LCGLFSMNCRMGFKMIITTFLYLVYLVQFDYMN 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 80/405 (20%)
Gr22bNP_001014456.1 7tm_7 17..385 CDD:285581 85/421 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.