DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58a and Gr36c

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_724040.1 Gene:Gr36c / 117486 FlyBaseID:FBgn0045485 Length:390 Species:Drosophila melanogaster


Alignment Length:454 Identity:82/454 - (18%)
Similarity:169/454 - (37%) Gaps:137/454 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLKFMYIYGIGCGL--MPAPLKKGQFLLGYKQRWYLIYTACLHGGLLTVLPFTFPHYMYDDSYMS 64
            ||..:|.||:..||  .......|:.   :.::|..:|...|...:       |..|:|      
  Fly     7 LLGAVYYYGLFIGLSNFEFDWNTGRV---FTKKWSTLYAIALDSCI-------FALYIY------ 55

  Fly    65 SNPVLKWTFNLTNITR------------IMAMFSG---------VLLMWFRRKRILNLGENLILH 108
                 .||.| |||..            ::|:.:|         ::|.|::|             
  Fly    56 -----HWTGN-TNIVNAIFGRANMLHEYVVAILTGLRIVTGLFTLILRWYQR------------- 101

  Fly   109 CLKCKTLDNRSK--KYSKLRKRVR-----NVLFQMLLVANLSILLGALILFRIHSVQRISKTAMI 166
               ||.:|..||  :....|.:||     .:|.:.:..:....|..|::|..:.||.        
  Fly   102 ---CKMMDLASKVVRMYVARPQVRRMSRWGILTKFIFGSITDGLQMAMVLSAMGSVD-------- 155

  Fly   167 VAHITQFIYVVFMMTGICVILLVLHWQSERLQIALKDLCSFLNHE------ERNSLTLSE----- 220
                :||...:.:...:.|||.:...|...:.:.::.....:|.|      |...|.||.     
  Fly   156 ----SQFYLGLGLQYWMFVILNMAMMQQHMIMLFVRTQFQLINTELRQVIDEAKDLLLSPRHQGV 216

  Fly   221 --NKANRSLGKLAKLFKLFAENQRLVREVFRTFDLPIALLLLKMFVTNVNLVY-------HGVQF 276
              .|......::..:.::.::.|.::.::...|.:..|:.....::::|...|       ||.:.
  Fly   217 FMTKCCSLADQIENIARIQSQLQTIMNQMEEVFGIQGAMTYGGYYLSSVGTCYLAYSILKHGYEN 281

  Fly   277 GNDTIETSSYTRIVGQWVVISHYW----------SAVLLMNVVDD------VTRRSDLKMGDLLR 325
            .:.|:.|          |::::.|          :..::::|.||      :..:..:.:|..:|
  Fly   282 LSMTLST----------VILAYSWCFFYYLDGMLNLSVMLHVQDDYWEMLQILGKRTIFVGLDVR 336

  Fly   326 EFSHLELVKRDFHLQLELFSDHLRCHPSTYKVCGLFIFNKQTSLAYFFYVLVQVLVLVQFDLKN 389
                ||....:.:|||      :| :|....|..|:...:..::|.|..::...:.|:|:|:::
  Fly   337 ----LEEAFENLNLQL------IR-NPLKITVVKLYDVTRSNTMAMFGNLITHSIFLIQYDIEH 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 77/435 (18%)
Gr36cNP_724040.1 7tm_7 8..389 CDD:285581 81/451 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.