DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58a and Gr93b

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_732664.2 Gene:Gr93b / 117472 FlyBaseID:FBgn0045470 Length:395 Species:Drosophila melanogaster


Alignment Length:439 Identity:88/439 - (20%)
Similarity:169/439 - (38%) Gaps:116/439 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLKFMYIYGIGCGLMPAPL-KKGQFLLGYKQRWYLIYTACLHGGLLTVLPFTFPHYMYD----- 59
            :||:..::||...|::...: :|...|:...:|.||  ..||   ::.:|...|..|.||     
  Fly    22 ILLRSCFLYGTFFGVITFRIERKDSQLVAINRRGYL--WICL---VIRLLASCFYGYSYDAWSGQ 81

  Fly    60 --DSYMSSNPVLKWTFNLTNITRIMAMFSGVLLMWFRRKRILNLGENLILHCLKCKTLDNRSKKY 122
              |.|:.:    .:.|.|.... |.::...|:..||        ||.||          |...::
  Fly    82 YEDMYLRA----FFGFRLIGCL-ICSVIILVMQFWF--------GEELI----------NLVNRF 123

  Fly   123 SKLRKRVRNVLFQ-----------MLLVANLSILLGALILFRIHSVQRISK-----------TAM 165
            .:|.:|::::...           :|:.:.:..||...:.||:    .:|.           |::
  Fly   124 LQLFRRMQSLTNSPKNRFGDRAEFLLMFSKVFSLLFVFMAFRL----MLSPWFLLTLVCDLYTSV 184

  Fly   166 IVAHITQFIYVVFMMTGI----------CVILLVLHWQSERLQIALKDLCSFLNHEERNSLTLSE 220
            ....||...:|.::..|:          |           :|:..|:.|     :.|.||...:.
  Fly   185 GTGMITHLCFVGYLSIGVLYRDLNNYVDC-----------QLRAQLRSL-----NGENNSFRNNP 233

  Fly   221 NKANRSLGKLAKLFKLFAENQRLVREVFRTFDLPIALLLLKMFVTNVNLVYHGV---QFGNDTIE 282
            ....:::..|.|...|:.|..::.|...:.||||:.|.|.:..:....:.||.:   |:.     
  Fly   234 QPTRQAISNLDKCLYLYDEIHQVSRSFQQLFDLPLFLSLAQSLLAMSMVSYHAILRRQYS----- 293

  Fly   283 TSSYTRIVGQWVVISHYWSAV--LLMNVV-DDVTRRSDLKMGDLLREFSHLELVKRD---FHLQL 341
                          .:.|..|  ||::|| ..::..|.:....|:|..|.......|   :|.:|
  Fly   294 --------------FNLWGLVIKLLIDVVLLTMSVHSAVNGSRLIRRLSFENFYVTDSQSYHQKL 344

  Fly   342 ELFSDHLRCHPSTYKVCGLFIFNKQTSLAYFFYVLVQVLVLVQFDLKNK 390
            |||...|:.........|||..:.:.:|.:...::..::.|||:.::::
  Fly   345 ELFLGRLQHQELRVFPLGLFEVSNELTLFFLSAMVTYLVFLVQYGMQSQ 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 84/418 (20%)
Gr93bNP_732664.2 7tm_7 24..391 CDD:285581 87/433 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.