DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58a and Gr93c

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_732665.1 Gene:Gr93c / 117471 FlyBaseID:FBgn0045469 Length:397 Species:Drosophila melanogaster


Alignment Length:413 Identity:82/413 - (19%)
Similarity:157/413 - (38%) Gaps:93/413 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YLIYTACLHGGLLTVLPFTFPHYMYDDSYMSSN-PVLKW---TFNLTNITRIMAMFSGV------ 88
            ::::.:|.:|.:|.|:.|.......|||.:..| ...||   :..|.::|.:....:..      
  Fly    16 FILFCSCHYGRILGVICFDIGQRTSDDSLVVRNRHQFKWFCLSCRLISVTAVCCFCAPYVADIED 80

  Fly    89 ----LLMWFRRKRILNLGENLIL--HCLKCKTLDNRSKKYSKLRKRVRNVLFQMLLVANLSILLG 147
                ||..||....|..|..:|:  .|.: |.|......:.:|.:|||                 
  Fly    81 PYERLLQCFRLSASLICGICIIVVQVCYE-KELLRMIISFLRLFRRVR----------------- 127

  Fly   148 ALILFRIHSVQRI---SKTAMIVAHITQFIYVVF-----------------MMTGICVI------ 186
                 |:.|::||   .|....:. :.:||.:|:                 :...:|.|      
  Fly   128 -----RLSSLKRIGFGGKREFFLL-LFKFICLVYELYSEICQLWHLPDSLSLFATLCEIFLEIGS 186

  Fly   187 LLVLH-----WQSERLQIALKDLCSFLNHEERNSLTLSENKANRSLG---------KLAKLFKLF 237
            |:::|     :.|  :.....::.||...|.|..|...|......:|         ::.:...::
  Fly   187 LMIIHIGFVGYLS--VAALYSEVNSFARIELRRQLRSLERPVGGPVGRKQLRIVEYRVDECISVY 249

  Fly   238 AENQRLVREVFRTFDLPIALLLL-KMFVTNVNLVYHGVQFGNDTIETSSYTRIVGQW-VVISHYW 300
            .|.:|:.|...|..:||:.::|| |:|.|.: |.|..:      |....|.|.:|.| :|:..:.
  Fly   250 DEIERVGRTFHRLLELPVLIILLGKIFATTI-LSYEVI------IRPELYARKIGMWGLVVKSFA 307

  Fly   301 SAVLLMNVVDDVTRRSDLKMGDLLREFSHLELVKRDFHLQLELFSDHLRCHPSTYKVCGLFIFNK 365
            ..:||...|.:....|.:.....|..|...:  .:.:|::.|:|...|.......:..|||..:.
  Fly   308 DVILLTLAVHEAVSSSRMMRRLSLENFPITD--HKAWHMKWEMFLSRLNFFEFRVRPLGLFEVSN 370

  Fly   366 QTSLAYFFYVLVQVLVLVQFDLK 388
            :..|.:...::.....:||:.::
  Fly   371 EVILLFLSSMITYFTYVVQYGIQ 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 80/396 (20%)
Gr93cNP_732665.1 7tm_7 18..393 CDD:285581 82/409 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.