DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58a and Gr98c

DIOPT Version :9

Sequence 1:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:410 Identity:80/410 - (19%)
Similarity:160/410 - (39%) Gaps:118/410 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YLIYTACLHGGLLTVLPFTFPHYMYDDSYMSSNPVLKWTFNLTNITRIMAMFSGVLLMWF----R 94
            |.:|       |:.:|...|  |.:..:.:|.:..: :.|::.:.:::|......|::..    :
  Fly    49 YSLY-------LIAILLMVF--YEFHANIVSLHLEI-YKFHVEDFSKVMGRTQKFLIVAIATCNQ 103

  Fly    95 RKRILNLGE---------NLILHCLKCKTLDNRSKKYS--------KLRKRVRNVLFQMLLVANL 142
            ...:||.|.         ||.|      .:|..||.:.        :||..:...|:.::::..:
  Fly   104 LNILLNYGRLGLIYDEIANLDL------GIDKSSKNFCGKSHWWSFRLRLTLSIGLWMVIIIGVI 162

  Fly   143 -SILLGALILFRIHSVQRISKTAMIVAHITQFIYVVFMMTG--ICVILLVLH-------WQSERL 197
             .:.||....| .|.|.::         :||.|.::..:.|  .|:.:|:::       ...|:|
  Fly   163 PRLTLGRAGPF-FHWVNQV---------LTQIILIMLQLKGPEYCLFVLLVYELILRTRHVLEQL 217

  Fly   198 QIALKD---------LCSFLNHEERNSLTLSENKANRSLGKLAKLFKLFAENQRLVREVFRTFDL 253
            :..|:|         ||          :||.:|:.            |.....|||.|:...|..
  Fly   218 KDDLEDFDCGARIQELC----------VTLKQNQL------------LIGRIWRLVDEIGAYFRW 260

  Fly   254 PIALLLLKMFVTNVNLVYHGVQFGNDTIETSSYTRIVGQWVVISH------YWS--AVLLMNVVD 310
            .:.||.|...:|.:::|...:....|..:.....|: |....:|.      ::|  .|...|.:.
  Fly   261 SMTLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRL-GSITFLSFNLLLTCFFSECCVKTYNSIS 324

  Fly   311 DVTRRSDLKMGDL--LREFSHLELVKRDFHLQLELFSDHLRCHPSTYKVCGLFIFNKQTSLAYFF 373
            .:..    ::|.|  ..||..|::..:::.||::    ||:.   .:...|||..|    :..|.
  Fly   325 YILH----QIGCLPTAEEFQMLKMGLKEYILQMQ----HLKL---LFTCGGLFDIN----IKLFG 374

  Fly   374 YVLV----QVLVLVQFDLKN 389
            .:||    .|:::|||.:::
  Fly   375 GMLVTLCGYVIIIVQFKIQD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 73/388 (19%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 80/407 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.