DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr59d and Gr43a

DIOPT Version :9

Sequence 1:NP_611758.2 Gene:Gr59d / 117343 FlyBaseID:FBgn0041236 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001286158.1 Gene:Gr43a / 35655 FlyBaseID:FBgn0041243 Length:453 Species:Drosophila melanogaster


Alignment Length:459 Identity:85/459 - (18%)
Similarity:157/459 - (34%) Gaps:141/459 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IFALLLYQTMRKSVVNV----MWKYANSLHEYVFLVIAGFRVVCVFLELVSRWSQRRTFVRLFNS 110
            :.||..|.|:|.|...|    .|.:.        :..|...||.|||..........:.:.:..|
  Fly    16 VLALAPYATVRNSKGRVEIGRSWLFT--------VYSATLTVVMVFLTYRGLLFDANSEIPVRAS 72

  Fly   111 FRRLYQRNPDI----IQYCRRSIVSKFFC--VTMTETLHIIVTLAMMRNRLSIALALR--IWAVL 167
            ||.....:..:    :.....:|||..:|  .::.:||.:...|..:.|.|:.....|  .|..|
  Fly    73 FRMKSATSKVVTALDVSVVVMAIVSGVYCGLFSLNDTLELNDRLNKIDNTLNAYNNFRRDRWRAL 137

  Fly   168 SLTAI----INVII--------------------------------TQYYVATAC---------- 186
            .:.|:    |::::                                :.|::.|..          
  Fly   138 GMAAVSLLAISILVGLDVGTWMRIAQDMNIAQSDTELNVHWYIPFYSLYFILTGLQVNIANTAYG 202

  Fly   187 VRGRYALLNKDL-----------QAIVTESQSLVPNGG--------------------------- 213
            :..|:..||:.|           .||..:..|.|.|..                           
  Fly   203 LGRRFGRLNRMLSSSFLAENNATSAIKPQKVSTVKNVSVNRPAMPSALHASLTKLNGETLPSEAA 267

  Fly   214 -----------GVFVTKCCYLADR-----LERIAKSQSDLQELVENLSTAYEGEVVCLVITYYLN 262
                       .|.:.|..|...:     |:.:|.|...|.:.|..||.::...|:.::::..|:
  Fly   268 GDKAAARSLILNVELLKLGYFPAKNKGLLLKSLADSHESLGKCVHLLSNSFGIAVLFILVSCLLH 332

  Fly   263 MLGTSYLLF--SISKYGNFGNNLLVIITLCGIVYFVFYVVD-CWINAFNVFYLLDAHDKMVKLL- 323
            ::.|:|.||  .:||..| |...:.::.:|.....:..||: |.:.|       ....|.:::: 
  Fly   333 LVATAYFLFLELLSKRDN-GYLWVQMLWICFHFLRLLMVVEPCHLAA-------RESRKTIQIVC 389

  Fly   324 -NKRTLFQPGLDHRLEMVFENFALNLVRNPLKLHMYGLFEFGRG--TSFAVFNSLLTHSLLLIQY 385
             .:|.:.:|.|...:    :.|...|:.........||....|.  ||||  :::.|:.::|||:
  Fly   390 EIERKVHEPILAEAV----KKFWQQLLVVDADFSACGLCRVNRTILTSFA--SAIATYLVILIQF 448

  Fly   386 DVQN 389
            ...|
  Fly   449 QRTN 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59dNP_611758.2 7tm_7 9..389 CDD:285581 84/457 (18%)
Gr43aNP_001286158.1 7tm_7 10..449 CDD:285581 84/454 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.