DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr59d and egl-47

DIOPT Version :9

Sequence 1:NP_611758.2 Gene:Gr59d / 117343 FlyBaseID:FBgn0041236 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:437 Identity:83/437 - (18%)
Similarity:159/437 - (36%) Gaps:134/437 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RKSVVNVMWK----YANSLHEYVFLVIAGFRVVCVFLELVSRWSQR----RTFVR---------- 106
            |:|:....|:    .:|||...:||    ||::.:|.....|.|:|    |:.::          
 Worm    92 RESLFECSWRGVHCVSNSLRSILFL----FRLLAIFPATTDRKSRRKRNHRSIIKLILYVNYIVL 152

  Fly   107 --LFNSFRRLYQRNPDIIQYCRR--------SIVSKFFCVTMTETLHIIVTLAM----------- 150
              |.|||  |.:.|..::...:.        ::.|..........:.:||..|:           
 Worm   153 AVLLNSF--LIKMNFKVLMLYKHKFGLMHTGTVASMITATKPVINVFVIVLSAIKFKSHQRLLKT 215

  Fly   151 -------MRNRLSIALALRIW--------AVLSLTAIINVIITQYYVATACVRGRYALLNKDLQA 200
                   .|:...::..|||:        .::..:|:|..::.  :|.|..:.|.:.|  .|...
 Worm   216 IDMVDVCFRSAFGVSPPLRIYKFVFFFTLLIIFFSALILKVVE--FVGTGEIFGEHIL--TDCSF 276

  Fly   201 IVTESQSL---VP----NGGGVFVTKCC-------------------YLADRLERIAKSQSDLQE 239
            |:....||   :|    :...:.|...|                   :..::..||...|..:.:
 Worm   277 ILVPVLSLWNIIPLLYYHLYNILVRFYCRTLIKSMNREHKKRHFSLKFYYEQFTRITNVQEAVGD 341

  Fly   240 LVENL---STAYEGEVVCLVITYYLNMLGTSYLLFSIS-----------KYGNFGNNLLVIITLC 290
            :...|   |.|:...|:||.: |:|:. .||.||..|:           |.     |:.|.:.:|
 Worm   342 VFNPLLLFSLAWSLLVLCLTL-YFLSE-PTSTLLVPITPEQVTNPKIREKL-----NITVHVKIC 399

  Fly   291 GIVYFVFYVVDCWINAFNVFYL----LDAHDKMVKLLNKRTLFQPGLDHRLEMVFENFALN-LVR 350
            ...|.|...:      .::..:    :..::...:::|......|..:..|    :.|.:: .|.
 Worm   400 WAAYQVVMAI------LHIIIICSTGMMTNETTRQIVNAVLRIVPDANADL----DRFQISCFVH 454

  Fly   351 NPLKLHMYGL-----FEFGRGTSFAVFNSLLTHSLLLIQYD---VQN 389
            ......|:|:     |...|.|.|.:.:.::|:||||.::.   |||
 Worm   455 KMTTQFMWGMTVWRAFPLERTTFFTLISVIVTYSLLLFRFKDDMVQN 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59dNP_611758.2 7tm_7 9..389 CDD:285581 81/435 (19%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 75/411 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.