DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98c and Gr98a

DIOPT Version :9

Sequence 1:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_651564.1 Gene:Gr98a / 43305 FlyBaseID:FBgn0039520 Length:391 Species:Drosophila melanogaster


Alignment Length:442 Identity:89/442 - (20%)
Similarity:177/442 - (40%) Gaps:90/442 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MEAKRSRLLTTARPYL-QVLSLFGLTPPAEFFTRTLRKRRRFCWMAGYSLYLIAILLMVFYEFHA 66
            ||.....|...:..|: :::...|:.|    |.:.|.. :.||    |.|..:::....::.|  
  Fly     1 MEQMSGELHAASLLYMRRLMKCLGMLP----FGQNLFS-KGFC----YVLLFVSLGFSSYWRF-- 54

  Fly    67 NIVSLHLEI-YKFHVEDFSKVMGRTQKFLIVAIATCNQLNIL-LNYG--------RLGLIYDEIA 121
               |...|. |.|..:.||..:..:.   .||:...:.:.:| |.:|        :|..|:.:| 
  Fly    55 ---SFDYEFDYDFLNDRFSSTIDLSN---FVALVLGHAIIVLELLWGNCSKDVDRQLQAIHSQI- 112

  Fly   122 NLDLGIDKSS---KNFCGKSHW--WSFRLRLTLSIGLWMVIIIGVI---PRLTLGRAGPFFHWVN 178
            .|.||...|:   :.:|   :|  .|..:|       |::.|:..|   ..||          :|
  Fly   113 KLQLGTSNSTDRVRRYC---NWIYGSLIIR-------WLIFIVVTIYSNRALT----------IN 157

  Fly   179 QVLTQIILIMLQLKGPEYCLFVLLVY-ELILRTRHVLEQL-KDDLEDFDCGARIQELCV-TLKQN 240
            ...::::.:....:...||..:|.:| |||:...:||::| :...|.:.    |:.|.: .|.:.
  Fly   158 ATYSELVFLARFSEFTLYCAVILFIYQELIVGGSNVLDELYRTRYEMWS----IRRLSLQKLAKL 218

  Fly   241 QLLIGRIWRLVDEIGAYFRWSMTLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLS-F 304
            |.:...:|:.:..:..||:.|:..|.:...:....:..|..:..::.......:.:.::..:. .
  Fly   219 QAIHNSLWQAIRCLECYFQLSLITLLMKFFIDTSALPYWLYLSRVEHTRVAVQHYVATVECIKLL 283

  Fly   305 NLLLTCFFSECC---VKTYNSISYILHQIGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLF 366
            .:::.|:....|   .:.:.|:.|      .:.|......|...|:...||:...|..|:.||:.
  Fly   284 EIVVPCYLCTRCDAMQRKFLSMFY------TVTTDRRSSQLNAALRSLNLQLSQEKYKFSAGGMV 342

  Fly   367 DINIKLFGGMLVTLCGYVIIIVQFKIQDFALIGYR----------QNTSDTS 408
            |||.::.|.....:..|::|.:||.      |.:|          ||.:.||
  Fly   343 DINTEMLGKFFFGMISYIVICIQFS------INFRAKKMSNEQMSQNITSTS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 80/403 (20%)
Gr98aNP_651564.1 7tm_7 13..370 CDD:285581 81/410 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014335
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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