DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98c and Gr68a

DIOPT Version :10

Sequence 1:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_524027.2 Gene:Gr68a / 39324 FlyBaseID:FBgn0041231 Length:389 Species:Drosophila melanogaster


Alignment Length:251 Identity:57/251 - (22%)
Similarity:94/251 - (37%) Gaps:80/251 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 QIILIMLQLKGPEYCLFVLLVYE----LILRTRHV--------LEQLKDDLEDFDCGARIQELCV 235
            ||||:::        .|:.|:|.    |.|||..:        |.|..|.....|||.       
  Fly   164 QIILLLI--------YFLQLLYSTLLALYLRTLMMNLAQRIGFLNQKLDTFNLQDCGH------- 213

  Fly   236 TLKQNQLLIGRIWRLVD---EIGAYFRW---------SMTLLFLYNGLTILHVVNWAIIRSIDPN 288
              .:|       ||.:.   |:...||:         .::||| |.|.:...|.|.:.:...   
  Fly   214 --MEN-------WRELSNLIEVLCKFRYITENINCVAGVSLLF-YFGFSFYTVTNQSYLAFA--- 265

  Fly   289 DCCQLNRLGSITFLSFNLLLTCFF------------SEC--CVKTYNSISYILHQIGCLPTAEEF 339
             ......|.|.|.::..:.|:|.:            |.|  .....|..:.||.:|  ...:::|
  Fly   266 -TLTAGSLSSKTEVADTIGLSCIWVLAETITMIVICSACDGLASEVNGTAQILARI--YGKSKQF 327

  Fly   340 QMLKMGLKEYILQMQHLKLLFTCGGLFDIN----IKLFGGMLVTLCGYVIIIVQFK 391
            |.|   :.:::.:.....|.||..|.|.|:    .|:|..:..    |::|::|||
  Fly   328 QNL---IDKFLTKSIKQDLQFTAYGFFSIDNSTLFKIFSAVTT----YLVILIQFK 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98cNP_524531.2 7tm_7 15..393 CDD:462463 57/251 (23%)
Gr68aNP_524027.2 7tm_7 7..379 CDD:462463 57/251 (23%)

Return to query results.
Submit another query.