DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98c and egl-47

DIOPT Version :9

Sequence 1:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001023728.1 Gene:egl-47 / 183687 WormBaseID:WBGene00001211 Length:522 Species:Caenorhabditis elegans


Alignment Length:282 Identity:59/282 - (20%)
Similarity:101/282 - (35%) Gaps:63/282 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VLSLFGLTP--PAEFFTRTLRKR--RRFCWMAGYSLYLIAILLMVFYEFHANIVSLHLEIYKF-- 78
            :|.||.|..  ||....::.|||  |....:..|..|::..:|:..:....|...|.|..:||  
 Worm   113 ILFLFRLLAIFPATTDRKSRRKRNHRSIIKLILYVNYIVLAVLLNSFLIKMNFKVLMLYKHKFGL 177

  Fly    79 -HVEDFSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGKS---H 139
             |....:.::..|:..:.|.:...:.:. ..::.||      :..:|: :|...::..|.|   .
 Worm   178 MHTGTVASMITATKPVINVFVIVLSAIK-FKSHQRL------LKTIDM-VDVCFRSAFGVSPPLR 234

  Fly   140 WWSFRLRLTLSIGLWMVIIIGV----------------------IPRLTLGRAGP--FFHWVNQV 180
            .:.|....||.|..:..:|:.|                      :|.|:|....|  ::|..|  
 Worm   235 IYKFVFFFTLLIIFFSALILKVVEFVGTGEIFGEHILTDCSFILVPVLSLWNIIPLLYYHLYN-- 297

  Fly   181 LTQIILIMLQLKGPEYCLFVLLVYELILRTRHVLEQLKDDLEDFDCGARIQELCVTLKQNQLLIG 245
                ||:..      ||..::.......:.||.  .||...|.|.....:||....:....||..
 Worm   298 ----ILVRF------YCRTLIKSMNREHKKRHF--SLKFYYEQFTRITNVQEAVGDVFNPLLLFS 350

  Fly   246 RIWRLVDEIGAYFRWSMTLLFL 267
            ..|.|:       ...:||.||
 Worm   351 LAWSLL-------VLCLTLYFL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 59/282 (21%)
egl-47NP_001023728.1 7tm_7 110..495 CDD:303125 59/282 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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