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Protein Alignment Gr98c and lite-1
DIOPT Version :9
Sequence 1: | NP_524531.2 |
Gene: | Gr98c / 117336 |
FlyBaseID: | FBgn0046886 |
Length: | 408 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_509043.3 |
Gene: | lite-1 / 180894 |
WormBaseID: | WBGene00001803 |
Length: | 439 |
Species: | Caenorhabditis elegans |
Alignment Length: | 181 |
Identity: | 40/181 - (22%) |
Similarity: | 66/181 - (36%) |
Gaps: | 73/181 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 259 RWSM---TLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLSFNLLLTCFFSECCVKTY 320
:|:: ||..:|..|.|| .:.:||.||: |:.|..::.|:.|......::.:
Worm 40 KWAICDRTLYPIYYLLLIL-----GLNQSIRPNN--------SLLFRIYSWLVFCLLLFTTLRKF 91
Fly 321 NSISYILHQIGCLP--TAEEFQM--------------------LKMGLKEYILQMQHLK-LLFTC 362
| |:|..| |.|..|. |...|:.|.|..:.|| |...|
Worm 92 N-------QVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLYTLGAKRLKPLKILC 149
Fly 363 GGLFDINIK----------------LFGGML-VTLC--------GYVIIIV 388
.|.:|:: :|.|:| :|:. ||::.||
Worm 150 --QFSLNVRTKQAERRQFMINTFLAVFSGLLALTMAATYAMSKWGYILYIV 198
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Gr98c | NP_524531.2 |
7tm_7 |
15..393 |
CDD:285581 |
40/181 (22%) |
lite-1 | NP_509043.3 |
7tm_7 |
75..425 |
CDD:285581 |
27/133 (20%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR21143 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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