DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98c and Gr22d

DIOPT Version :9

Sequence 1:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster


Alignment Length:404 Identity:77/404 - (19%)
Similarity:149/404 - (36%) Gaps:83/404 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LFGLTPPAEFFTRTLRKR--RRFCWMAGYSLYLIA--ILLMVFYEFHANIVSLHLEIYK-----F 78
            |.|:.|    |....:||  ||..|:..:.:.:.:  ::|||..........:.|::::     :
  Fly    26 LLGIFP----FKYEPKKRRLRRSMWLILFGVVISSSLLILMVKQSAEDREHGIMLDVFQRNALLY 86

  Fly    79 HVEDFSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGKS----- 138
            .:.....|:|      :|:|.|.: |..|.....|..||:.:..|:      :|.||..:     
  Fly    87 QISSLMGVVG------VVSICTVH-LRTLWRSKHLEEIYNGLMLLE------AKYFCSNAVECPA 138

  Fly   139 -HWWSFRLRLTLSIGL---WMVIIIGVIPRLTLGRAGPFFHWVNQVLTQIILIMLQLKGPEYCLF 199
             ..:..:..:.:.:||   |||         ..|........:|.::..::.:...|....|.|.
  Fly   139 FDGYVIQKGVVIVVGLLAPWMV---------HFGMPDSKLPVLNVLVVSMVKLGTLLLALHYHLG 194

  Fly   200 VLLVYELILRTRHVLEQLKDDLEDFDCG--ARIQELCVTLKQNQLLIGRIWRLVDEIGAYFRWSM 262
            |:::|..:......|..|...|.....|  :|::.|   ||....|:....:|.|.........|
  Fly   195 VVIIYRFVWLINRELLSLVCSLRGNHKGSSSRVRFL---LKLYNKLVNLYSKLADCYDCQTVLMM 256

  Fly   263 TLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLSFNLLLTCF---------------- 311
            .:....|.:...:::.:.|                |::.:||.::|..|                
  Fly   257 AIFLAANIIVCFYMIVYRI----------------SLSKMSFFVMLIMFPLAIANNFMDFWLSMK 305

  Fly   312 FSECCVKTYNSISYILHQIGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFDINIKLFGGM 376
            ..:...||....|.||.....:...:  :.|::.:.::.|...|.:..|...|||.:|.::...|
  Fly   306 VCDLLQKTGRQTSMILKLFNDIENMD--KDLEISISDFALYCSHRRFKFLHCGLFHVNREMGFKM 368

  Fly   377 LVTLCGYVIIIVQF 390
            .|....|::.:|||
  Fly   369 FVASVLYLLYLVQF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 77/404 (19%)
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 77/404 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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