DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98c and Gr28b

DIOPT Version :9

Sequence 1:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:478 Identity:95/478 - (19%)
Similarity:177/478 - (37%) Gaps:157/478 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KRSRLLTTA-------RPYLQVLSLFGLTPPAEFF----TRTLR---KRRRFCWMAG---YSLYL 53
            :|.|...||       ||...|..:.|||   .|:    |:|.:   |:..|.::.|   .::::
  Fly    30 RRFRRFVTAKQLYECLRPVFHVTYIHGLT---SFYISCDTKTGKKAIKKTIFGYINGIMHIAMFV 91

  Fly    54 IAILLMVF--------YEFHANI------------------------VSLH-LE--IYKFHVED- 82
            .|..|.::        |.|.:.|                        |..| ||  :.|||..| 
  Fly    92 FAYSLTIYNNCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPNHRLERCLQKFHTMDV 156

  Fly    83 ----------FSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGK 137
                      :|||:    :|..:.:.:...:|:|...|...::|            ||:.....
  Fly   157 QLQTVGVKIMYSKVL----RFSYMVLISMFLVNVLFTGGTFSVLY------------SSEVAPTM 205

  Fly   138 SHWWSFRLR---LTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVNQVL--------TQIILIMLQL 191
            :..::|.::   :.::|.|:......|..||.:         ||:||        |:.:..:.|.
  Fly   206 ALHFTFLIQHTVIAIAIALFSCFTYLVEMRLVM---------VNKVLKNLAHQWDTRSLKAVNQK 261

  Fly   192 KGPEYCLFVLLVYELILRTRHVLEQLKDDLEDFDCGARIQELCVTLKQNQLLIGRIWRLVDEIGA 256
            :....||....:|.::  |:...|.:::.:|                        |..|:.|..|
  Fly   262 QRSLQCLDSFSMYTIV--TKDPAEIIQESME------------------------IHHLICEAAA 300

  Fly   257 ----YFRWSMT-------LLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLSFNLLLTC 310
                ||.:.:.       |:.:::...:|..:.....|.      .:...:..:||.|..::|..
  Fly   301 TANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRE------SKFKTVEFVTFFSCQMILYL 359

  Fly   311 FF-------SECCVKTYNSISYILHQ-IGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFD 367
            ..       |...:|.......|:|. :....:||    :|..|:::.:|:.|||:.||..|||:
  Fly   360 IAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAE----VKEKLQQFSMQLMHLKINFTAAGLFN 420

  Fly   368 INIKLFGGMLVTLCGYVIIIVQF 390
            |:..|:..:...|..|:||::||
  Fly   421 IDRTLYFTISGALTTYLIILLQF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 91/462 (20%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 89/461 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.