DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98c and Gr39b

DIOPT Version :9

Sequence 1:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_724336.1 Gene:Gr39b / 117347 FlyBaseID:FBgn0041245 Length:369 Species:Drosophila melanogaster


Alignment Length:401 Identity:93/401 - (23%)
Similarity:167/401 - (41%) Gaps:55/401 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLTTARPYLQVLSLFGLTPPAEFFTRTLRKRRRFCWMAGYSLYLIAILLMVFYEFHANIVSLHLE 74
            :|.:..|||:..:|.||.|.:|...::     :|.... ||..||.:          |.|...:.
  Fly     1 MLYSFHPYLKYFALLGLVPWSESCAQS-----KFVQKV-YSAILIIL----------NAVHFGIS 49

  Fly    75 IY-KFHVEDFSKVMGRTQKFLI-VAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSKNFCGK 137
            || ....|.|..:|.....|:. :...|...|.::::|........|:..|.|.:....|...|:
  Fly    50 IYFPQSAELFLSLMVNVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKIHVGR 114

  Fly   138 SHWWSFRLRLTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVNQVLTQIILIMLQLKGPEYCLFVLL 202
            ..|.|:...|.|.||    .::.|:|.:.:..:|...::.:.:|: |::|.:|.      :.|||
  Fly   115 LKWQSYAKILALGIG----FLVTVLPSIYVALSGSLLYFWSSLLS-ILIIRMQF------VLVLL 168

  Fly   203 VYELI--------LRTRHVLEQLKDDLEDFDC--GARIQELC-----VTLKQNQLLIGRIWRLVD 252
            ..||:        :|.::|||   ..|...:|  ......||     :.|||:.:.:..::...:
  Fly   169 NVELLGHHVSLLGIRLQNVLE---CHLMGANCTLDGNANRLCSLEFLLALKQSHMQLHYLFTHFN 230

  Fly   253 EIGAYFRWSM--TLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLS-FNLLLTCFFSE 314
            ::   |.||:  |.:.|::..|:  .:.|.....::..:...|....|:...| ||:|:.|...|
  Fly   231 DL---FGWSILGTYVVLFSDSTV--NIYWTQQVLVEVYEYKYLYATFSVFVPSFFNILVFCRCGE 290

  Fly   315 CCVKTYNSISYILHQIGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFDINIKLFGGMLVT 379
            .|.:....|...|..:.|.|:.......|..|.|:|||::...|.....|....:..|...:|..
  Fly   291 FCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINAEGFMSTDNSLLMSILAA 355

  Fly   380 LCGYVIIIVQF 390
            ...|:|:::||
  Fly   356 KVTYLIVLMQF 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 92/396 (23%)
Gr39bNP_724336.1 7tm_7 5..367 CDD:303125 92/397 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.