DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rheb and rasd3

DIOPT Version :9

Sequence 1:NP_730950.2 Gene:Rheb / 117332 FlyBaseID:FBgn0041191 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001073403.1 Gene:rasd3 / 567084 ZFINID:ZDB-GENE-060818-9 Length:211 Species:Danio rerio


Alignment Length:204 Identity:53/204 - (25%)
Similarity:96/204 - (47%) Gaps:40/204 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MGYRSVGKSSLCIQFVEGQFVDSYDPTIENTF-----TKIERVKSQDYIVKLIDTAGQDEYSIFP 70
            :|...|||::|..:|::.:|...|..|:|...     |:..||:     ::::||:|  .|| ||
Zfish    16 LGAAGVGKTALITRFLQDRFDSKYTRTVEELHALEYDTEGARVR-----IEILDTSG--SYS-FP 72

  Fly    71 VQYSMDYH---GYVLVYSITSQKSFEVVKIIYEKLLDVMGKKYVPVVLVGNKIDL-HQERTVSTE 131
            ...::...   .:.|||:.....|.|.|:.:.|::|::.|:.:..:.::.||.|| .:.|..:.|
Zfish    73 AMRALCIRTGDAFALVYAADEPDSLEEVQRLREEILELKGESFTGITVIENKADLCSRSRQATAE 137

  Fly   132 EGKKLAESWRAAFLETSAKQNESVGDIFHQLL----------------------ILIENENGNPQ 174
            ..:.:.|.|.|.|:||||:..::|..:|..||                      .|.|.....|.
Zfish   138 AMRAVEEDWGAGFVETSARTGDNVTAVFRDLLQQMKLPSRVSPALRRRTQTMSRELTEKREKPPM 202

  Fly   175 EK-SGCLVS 182
            :| :.|::|
Zfish   203 KKNNSCILS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhebNP_730950.2 RheB 5..182 CDD:206709 52/202 (26%)
rasd3NP_001073403.1 small_GTPase 9..173 CDD:197466 47/164 (29%)
P-loop_NTPase 12..211 CDD:304359 52/202 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.