DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rheb and ralba

DIOPT Version :10

Sequence 1:NP_730950.2 Gene:Rheb / 117332 FlyBaseID:FBgn0041191 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001003649.1 Gene:ralba / 445255 ZFINID:ZDB-GENE-040801-267 Length:207 Species:Danio rerio


Alignment Length:177 Identity:60/177 - (33%)
Similarity:103/177 - (58%) Gaps:7/177 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IAMMGYRSVGKSSLCIQFVEGQFVDSYDPTIENTFTKIERVKSQDYIVKLIDTAGQDEYSIFPVQ 72
            :.|:|...||||:|.:||:..:||:.|:||..:::.|...:..::..:.::|||||::|:.....
Zfish    17 VIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDN 81

  Fly    73 YSMDYHGYVLVYSITSQKSFEVVKIIYEKLLDVMGKK-YVPVVLVGNKIDLHQERTVSTEEGKKL 136
            |.....|::||:|||..:||.......|::|.|..:: .:|::|||||.||...|.||.:|.:..
Zfish    82 YFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLLVGNKSDLEDRRQVSVDEARGK 146

  Fly   137 AESWRAAFLETSAKQNESVGDIFHQLL------ILIENENGNPQEKS 177
            ||.|...::|||||...:|..:|..|:      .:.||::.|.:.|:
Zfish   147 AEEWAVQYVETSAKTRANVDKVFFDLMREVRAKKMSENKDKNGKGKN 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhebNP_730950.2 RheB 5..182 CDD:206709 60/177 (34%)
ralbaNP_001003649.1 RalA_RalB 15..178 CDD:206710 56/160 (35%)

Return to query results.
Submit another query.