DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98b and Gr58b

DIOPT Version :9

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_523808.2 Gene:Gr58b / 37502 FlyBaseID:FBgn0041238 Length:408 Species:Drosophila melanogaster


Alignment Length:417 Identity:81/417 - (19%)
Similarity:153/417 - (36%) Gaps:128/417 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 YVFYATAILATVFIVSYFNIIAIDEE-------VLEYN--VSDFTRVMGNIQKSLYSIMAIANHL 102
            |..|:..:...:|:..||.:..|.|:       ||::|  |..|.|.:..:  |.|..:.:..|.
  Fly    45 YTIYSFFVGIFLFLNLYFMVPRIMEDGYMKYNIVLQWNFFVMLFLRAIAVV--SCYGTLWLKRHK 107

  Fly   103 NM------LINYRRLGGIYKDIADLE--MDMDEASQCFGGQRQRFSFRFRMALCVGVWMILMVGS 159
            .:      ||.::|.|.|.:.|.|.:  :|:.|:       ..|...| ::.|....::...|..
  Fly   108 IIQLYKYSLIYWKRFGHITRAIVDKKELLDLQES-------LARIMIR-KIILLYSAFLCSTVLQ 164

  Fly   160 MPRLTMTAMGPFVSTLLKILTEFVMIMQQLKSLEYCVFVLIIYELVLRLRRTLSQLQEEFQDCEQ 224
            ...|::.....|::...: ||.|:..:        ||.:.....|||        |..:|     
  Fly   165 YQLLSVINPQIFLAFCAR-LTHFLHFL--------CVKMGFFGVLVL--------LNHQF----- 207

  Fly   225 QDMLQALCVALKRNQLLLGR----IWRLEGDVGSYFTPTMLL------LFLYNGLTILHMVNWAY 279
                  |.:.|..| .|.||    .|:....|.:....|:.|      :|.....|:       :
  Fly   208 ------LVIHLAIN-ALHGRKARKKWKALRSVAAMHLKTLRLARRIFDMFDIANATV-------F 258

  Fly   280 INKF------LYDSCCQYERFLVCST-----------------------LLVNLLLPCLLSQRCI 315
            ||.|      ||.: .||....:.|.                       :|.:::..|..:.:.:
  Fly   259 INMFMTAINILYHA-VQYSNSSIKSNGWGILFGNGLIVFNFWGTMALMEMLDSVVTSCNNTGQQL 322

  Fly   316 NAYNCFPRILHKIRCTSADPNFAMLTRGLREYSLQMEHLKLRFTCGGLFDIN----LKYFGGLLV 376
            ...:..|::..|::            |.|..:::|:...:|.:...|:.:::    |.|.|.:| 
  Fly   323 RQLSDLPKVGPKMQ------------RELDVFTMQLRQNRLVYKICGIVELDKPACLSYIGSIL- 374

  Fly   377 TIFGYIIILIQFKVQAIAANRYKKVVN 403
               ..:|||:||.::     |.::.:|
  Fly   375 ---SNVIILMQFDLR-----RQRQPIN 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 79/403 (20%)
Gr58bNP_523808.2 7tm_7 12..385 CDD:285581 79/402 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.