DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98b and lite-1

DIOPT Version :10

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:468 Identity:82/468 - (17%)
Similarity:164/468 - (35%) Gaps:147/468 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PPPQS--------FGHTPHR----------------RLRWYL--MTGY-VFYATAIL-------- 55
            |||.|        |.||...                |.:|.:  .|.| ::|...||        
 Worm     2 PPPSSHSNIFHSTFKHTVKETMANAKKTMIAKILSSRNKWAICDRTLYPIYYLLLILGLNQSIRP 66

  Fly    56 --ATVF-IVSY-------------FNIIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIANHLNM 104
              :.:| |.|:             ||.:.:.......|:.:|   ..|.:    |::.:.|.|.|
 Worm    67 NNSLLFRIYSWLVFCLLLFTTLRKFNQVGVRPNGTRENLQEF---FANPR----SMITLCNALIM 124

  Fly   105 L-----------INYRRLGGIYKDIADLEMDMDEASQCFGGQRQRFSFRFRMALCVGVWMILMVG 158
            |           :..:||..: |.:....:::....    .:|::|.....:|:..|:..:.|..
 Worm   125 LSGLLASLQLYTLGAKRLKPL-KILCQFSLNVRTKQ----AERRQFMINTFLAVFSGLLALTMAA 184

  Fly   159 SMPRLTMTAMGPFVSTL----LKILTEFVMIMQQLKSLEYCVFV---------LIIYELVLRLRR 210
            :   ..|:..|..:..:    |...|.|.:::.     .|.:||         ::.|:....:||
 Worm   185 T---YAMSKWGYILYIVGTPNLDTETIFCVLLD-----SYALFVSRAAISALAILFYQHCSVIRR 241

  Fly   211 TLSQLQEEFQDCEQ------QDMLQAL--CVALKRNQLLLGRIWRLEGDVGSYFTPTMLLLFLYN 267
            ::..|..|....||      :..||.:  |      |:...||:..:..:..|::   .:||...
 Worm   242 SIKHLINEMVPAEQDECPLPESSLQKIHDC------QISYQRIFNGKAVIEEYYS---FVLFYSY 297

  Fly   268 GLTI------------LHMVNWAYINKFLYDSCCQYERFLVCSTLLVNLL--LPCLL----SQRC 314
            |:.|            ...:.|:.:...:         ..:.:.:||.||  ||..:    ..|.
 Worm   298 GVCIPIFCFLMFVGMSAQSICWSEVVSIV---------IWIVNAILVLLLFSLPAFMINEDGDRL 353

  Fly   315 I-NAYNCFPRILHKIRCTSADPNFAMLTRGLREYSLQMEHLKLRFTCGGLFDINLKYFGGLLVTI 378
            : :::..:....|:.|      :..:|:: :..::.|:...||..:....|.::......|...|
 Worm   354 VASSFRMYHETFHEER------DLTVLSQ-MTFFTFQIHSTKLTLSACNYFYMDRSILLSLFSAI 411

  Fly   379 FGYIIILIQFKVQ 391
            ..|.:||.:|.::
 Worm   412 LTYFLILWEFDIK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 14..391 CDD:462463 82/466 (18%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 66/395 (17%)

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