DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98b and Gr28b

DIOPT Version :9

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:382 Identity:78/382 - (20%)
Similarity:151/382 - (39%) Gaps:97/382 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LMTGYVFYATAILATVFIVSY--------FNIIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIA 99
            :::|:: ..|.|..|.|:.::        |:.:.:..:.:...:. :::|:      .:|.|.:.
  Fly   123 IVSGFI-GVTVIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIM-YSKVL------RFSYMVLI 179

  Fly   100 NHLNMLINYRRLGGIYKDIADLEMDMDEASQCFGGQRQRFSFRFR---MALCVGVWMILMVGSMP 161
            :  ..|:|....||.:..:...|:....|        ..|:|..:   :|:.:.::.........
  Fly   180 S--MFLVNVLFTGGTFSVLYSSEVAPTMA--------LHFTFLIQHTVIAIAIALFSCFTYLVEM 234

  Fly   162 RLTMTAMGPFVSTLLKILT------EFVMIMQQLKSLEYCVFVLIIYELVLRLRRTLSQLQEEFQ 220
            ||.|      |:.:||.|.      ....:.|:.:||: |:....:|.:|.:....:.|      
  Fly   235 RLVM------VNKVLKNLAHQWDTRSLKAVNQKQRSLQ-CLDSFSMYTIVTKDPAEIIQ------ 286

  Fly   221 DCEQQDMLQALCVALKRNQLLLGRIWRLEGDVGSYFTPTMLLLFLYNGLTILHMVNWAYI----- 280
              |..::...:|.|              ......|||..:|.:.   .:..|.:|..||.     
  Fly   287 --ESMEIHHLICEA--------------AATANKYFTYQLLTII---SIAFLIIVFDAYYVLETL 332

  Fly   281 -------NKFLYDSCCQYERFLVCSTLLVNLLLPCLL--SQRCINAYNCFPRILHKI--RCTSAD 334
                   :||   ...::..|..|..:|..:.:..::  |.|.|........|:|.:  :..||:
  Fly   333 LGKSKRESKF---KTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSEKTGGIVHSLLNKTKSAE 394

  Fly   335 PNFAMLTRGLREYSLQMEHLKLRFTCGGLFDIN-LKYF--GGLLVTIFGYIIILIQF 388
                 :...|:::|:|:.|||:.||..|||:|: ..||  .|.|.|   |:|||:||
  Fly   395 -----VKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTT---YLIILLQF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 78/382 (20%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 76/380 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450303
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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