DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98b and Gr93d

DIOPT Version :9

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_732666.1 Gene:Gr93d / 117470 FlyBaseID:FBgn0045468 Length:381 Species:Drosophila melanogaster


Alignment Length:323 Identity:63/323 - (19%)
Similarity:119/323 - (36%) Gaps:75/323 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LNMLINYRRLGGIYKDIADLEMDMDEASQCFGGQRQRFSFRFRMALCVGVWMILMVGSMPRLTMT 166
            :|..::..|||         .:|:...|| |||.|:.|.....:...:..::.::|         
  Fly   112 VNQYLHIFRLG---------TLDIRRRSQ-FGGGRELFLLILSVCCQIHEYVFILV--------- 157

  Fly   167 AMGPFVSTLLKILTEFVMIMQQLKSLEYCV------FVLIIYELVLRL----RRTLSQLQEEFQD 221
                              |..:|...::.:      :|.||...::..    ..:|..|..|..|
  Fly   158 ------------------IASRLCGFQHIIWWVSYTYVFIICNSIMCFGFIWHLSLGVLYAELND 204

  Fly   222 CEQQDMLQALCVALKRNQLLLGRIWRLEGDVGSYFTPTM----LLLFLYNGLTILH-MVNWAYIN 281
            ..:.:.........|:.::.:.:...|..::.|..|...    :.|||...||:|. :|.|   .
  Fly   205 NLRFESGFQTAFLRKQQRIRVQKSMALFKEISSVVTSLQDIFNVHLFLSALLTLLQVLVVW---Y 266

  Fly   282 KFLYDSCCQYERFLVCSTLLVNL---LLPCLLSQRCINAYNCFPRILHKIRCTSADPNFAMLTR- 342
            |.:.|  ..:..|.:.|..|.||   |||.|..|...|.:.       :.|..:.|......:: 
  Fly   267 KMIID--LGFSDFRIWSFSLKNLIQTLLPVLAIQEAANQFK-------QTRERALDIFLVGKSKH 322

  Fly   343 GLREYSLQMEHLKL---RFTCGGLFDINLKYFGGLLVTIFGYIIILIQFKVQAIAANRYKKVV 402
            .::...:.:.||.|   |....|||:::.:.|..::..:|.|::    |..|.:...|.:.|:
  Fly   323 WMKSVEIFVTHLNLSEFRVNLLGLFNVSNELFLIIVSAMFCYLV----FVTQCVIVYRRRYVI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 60/310 (19%)
Gr93dNP_732666.1 7tm_7 11..375 CDD:285581 61/315 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.