DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr98b and Gr39a

DIOPT Version :9

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_724330.1 Gene:Gr39a / 117346 FlyBaseID:FBgn0264556 Length:381 Species:Drosophila melanogaster


Alignment Length:416 Identity:74/416 - (17%)
Similarity:132/416 - (31%) Gaps:162/416 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAQKSRLLARAFPYLDIF------------SVFALTPPPQSFGHTPHRRLRWYLMTGYVFYATA 53
            :|.|.:.|:....|:|.|.            :|..|.|          :||.|.::...|.|...
  Fly    89 LVVQNAWLIWLQAPHLRIVRQIEFYRRNHLANVRLLLP----------KRLLWLIIATNVVYMAN 143

  Fly    54 ILAT-----------VFIVSYFNIIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIANHLNMLI- 106
            .:.|           :|:::....      .|.|.|:.||  ||.     |..|.   |:..|: 
  Fly   144 FIKTCIFEWLTDASRLFVITSLGF------PLRYLVTSFT--MGT-----YFCMV---HIVRLVL 192

  Fly   107 --NYRRLGGIYKDIADLEMDMDEASQCFGGQRQRFSFRFRMALCVGVWMILMVGSMPRLTMTAMG 169
              |..::..|..:.|||:|....              |.|:.:|:.:...||:            
  Fly   193 DWNQSQINAIIDESADLKMTSPN--------------RLRLRVCLEMHDRLML------------ 231

  Fly   170 PFVSTLLKILTEFV-MIMQQLKSLEYCVFVLIIYELVLRLRRTLSQLQEEFQDCEQQDMLQALCV 233
             ..:..:.::..|: .:.....||:  |..:|...:|::.:::                     :
  Fly   232 -LCNDEISLVYGFIAWLSWMFASLD--VTGVIYLTMVIQTKKS---------------------I 272

  Fly   234 ALKRNQLLLGRIWRLEGDVGSYFTPTMLLLFLYNGLTILHMVNWAYINKFLYDSCCQYERFLVCS 298
            .||   |:...:|         .:||                                  |:.|:
  Fly   273 VLK---LITNVVW---------LSPT----------------------------------FMTCA 291

  Fly   299 TLLVNLLLPCLLSQRCINAYNCFPRILHKIRCTSADPNFAMLTRGLREYSLQMEHLKLRFTCGGL 363
            .        ..:|.|.....|...::|.|:..|...     |.|.:.::.|:....|...|..|.
  Fly   292 A--------SFMSNRVTIQANKTAKMLTKVPRTGTG-----LDRMIEKFLLKNLRQKPILTAYGF 343

  Fly   364 FDINLKYFGGLLVTIFGYIIILIQFK 389
            |.::......|...||.|::||:|||
  Fly   344 FALDKSTLFKLFTAIFTYMVILVQFK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 71/404 (18%)
Gr39aNP_724330.1 7tm_7 8..372 CDD:285581 74/416 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450309
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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