DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98b and Gr58a

DIOPT Version :9

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_726135.2 Gene:Gr58a / 117344 FlyBaseID:FBgn0041239 Length:395 Species:Drosophila melanogaster


Alignment Length:421 Identity:90/421 - (21%)
Similarity:171/421 - (40%) Gaps:119/421 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RWYLMTGYVFYATAI---LATVFIVSYFNIIAID-----EEVLE--YNVSDFTRVMGNIQKSLYS 94
            ||||:     |...:   |.||...::.:.:..|     ..||:  :|:::.||:|     :::|
  Fly    32 RWYLI-----YTACLHGGLLTVLPFTFPHYMYDDSYMSSNPVLKWTFNLTNITRIM-----AMFS 86

  Fly    95 IMAIANHLNMLINYRRLGGIYKDIADLEMD----------MDEASQCFGGQRQRF-SFRFRM--- 145
            .:       :|:.:||     |.|.:|..:          :|..|:.:...|:|. :..|:|   
  Fly    87 GV-------LLMWFRR-----KRILNLGENLILHCLKCKTLDNRSKKYSKLRKRVRNVLFQMLLV 139

  Fly   146 ---ALCVGVWMILMVGSMPRLTMTAMGPFVSTLLKILTEFVMIMQQLKSLEYCVFVLIIYELVLR 207
               ::.:|..::..:.|:.|::.|||      ::..:|:|:.::..:..:  ||.:|:::....|
  Fly   140 ANLSILLGALILFRIHSVQRISKTAM------IVAHITQFIYVVFMMTGI--CVILLVLHWQSER 196

  Fly   208 LRRTLSQLQEEFQDCEQQDM-------------LQALCVALKRNQLLLGRIWRLEGDVGSYFTPT 259
            |:..|..|.......|:..:             |..|......||.|:..::|      ::..|.
  Fly   197 LQIALKDLCSFLNHEERNSLTLSENKANRSLGKLAKLFKLFAENQRLVREVFR------TFDLPI 255

  Fly   260 MLLL---FLYNGLTILHMVNWAYINKFLYDSCCQYER----FLVCSTLLVNLLLPCLLSQRCINA 317
            .|||   |:.|...:.|.|.:.  |..:..|  .|.|    ::|.|.....:||           
  Fly   256 ALLLLKMFVTNVNLVYHGVQFG--NDTIETS--SYTRIVGQWVVISHYWSAVLL----------- 305

  Fly   318 YNCFPRILHKIRCTSAD--PNFAMLTRGLREYSLQME----HLKLR---FTCGGLFDIN----LK 369
            .|....:..:......|  ..|:.|....|::.||:|    ||:..   :...|||..|    |.
  Fly   306 MNVVDDVTRRSDLKMGDLLREFSHLELVKRDFHLQLELFSDHLRCHPSTYKVCGLFIFNKQTSLA 370

  Fly   370 YFGGLLVTIFGYIIILIQFKVQAIAANRYKK 400
            ||..:||    .:::|:||.::    |:.:|
  Fly   371 YFFYVLV----QVLVLVQFDLK----NKVEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 88/410 (21%)
Gr58aNP_726135.2 7tm_7 3..373 CDD:285581 82/391 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.