DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr98b and Gr98c

DIOPT Version :9

Sequence 1:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_524531.2 Gene:Gr98c / 117336 FlyBaseID:FBgn0046886 Length:408 Species:Drosophila melanogaster


Alignment Length:400 Identity:196/400 - (49%)
Similarity:274/400 - (68%) Gaps:0/400 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAQKSRLLARAFPYLDIFSVFALTPPPQSFGHTPHRRLRWYLMTGYVFYATAILATVFIVSYFN 65
            |.|::||||..|.|||.:.|:|.||||.:.|..|..:|.|:..|.||..|..|||..||...:.|
  Fly     3 MEAKRSRLLTTARPYLQVLSLFGLTPPAEFFTRTLRKRRRFCWMAGYSLYLIAILLMVFYEFHAN 67

  Fly    66 IIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIANHLNMLINYRRLGGIYKDIADLEMDMDEASQ 130
            |:::..|:.:::|.||::|||..||.|...:|..|.||:|:||.|||.||.:||:|::.:|::|:
  Fly    68 IVSLHLEIYKFHVEDFSKVMGRTQKFLIVAIATCNQLNILLNYGRLGLIYDEIANLDLGIDKSSK 132

  Fly   131 CFGGQRQRFSFRFRMALCVGVWMILMVGSMPRLTMTAMGPFVSTLLKILTEFVMIMQQLKSLEYC 195
            .|.|:...:|||.|:.|.:|:||::::|.:||||:...|||...:.::||:.::||.|||..|||
  Fly   133 NFCGKSHWWSFRLRLTLSIGLWMVIIIGVIPRLTLGRAGPFFHWVNQVLTQIILIMLQLKGPEYC 197

  Fly   196 VFVLIIYELVLRLRRTLSQLQEEFQDCEQQDMLQALCVALKRNQLLLGRIWRLEGDVGSYFTPTM 260
            :|||::|||:||.|..|.||:::.:|.:....:|.|||.||:||||:||||||..::|:||..:|
  Fly   198 LFVLLVYELILRTRHVLEQLKDDLEDFDCGARIQELCVTLKQNQLLIGRIWRLVDEIGAYFRWSM 262

  Fly   261 LLLFLYNGLTILHMVNWAYINKFLYDSCCQYERFLVCSTLLVNLLLPCLLSQRCINAYNCFPRIL 325
            .||||||||||||:||||.|.....:.|||..|....:.|..||||.|..|:.|:..||....||
  Fly   263 TLLFLYNGLTILHVVNWAIIRSIDPNDCCQLNRLGSITFLSFNLLLTCFFSECCVKTYNSISYIL 327

  Fly   326 HKIRCTSADPNFAMLTRGLREYSLQMEHLKLRFTCGGLFDINLKYFGGLLVTIFGYIIILIQFKV 390
            |:|.|......|.||..||:||.|||:||||.||||||||||:|.|||:|||:.||:||::|||:
  Fly   328 HQIGCLPTAEEFQMLKMGLKEYILQMQHLKLLFTCGGLFDINIKLFGGMLVTLCGYVIIIVQFKI 392

  Fly   391 QAIAANRYKK 400
            |..|...|::
  Fly   393 QDFALIGYRQ 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 186/377 (49%)
Gr98cNP_524531.2 7tm_7 15..393 CDD:285581 186/377 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2F6UU
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014335
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.