DRSC/TRiP Functional Genomics Resources

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Protein Alignment clt and GID1B

DIOPT Version :10

Sequence 1:NP_536784.1 Gene:clt / 117300 FlyBaseID:FBgn0000326 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_191860.1 Gene:GID1B / 825476 AraportID:AT3G63010 Length:358 Species:Arabidopsis thaliana


Alignment Length:298 Identity:69/298 - (23%)
Similarity:100/298 - (33%) Gaps:100/298 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRPCGRLIFTRFCSSMKVKVPVKQGVLVGRQKKLVNGLEYNSFLGVPYAEPPVGELRFRSPRPLE 67
            |..|.|:            ||:...||:...|           |.......|.|...    |.|.
plant     9 LNECKRI------------VPLNTWVLISNFK-----------LAYKVLRRPDGSFN----RDLA 46

  Fly    68 RFQKQELDCSKEGNVSYQRD-PFTLEVAGSEDCLFLNVYAP---------------KVKSTRTPL 116
            .|    ||.....| |:..| .|:.:...|...|...:|.|               |..||...:
plant    47 EF----LDRKVPAN-SFPLDGVFSFDHVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIV 106

  Fly   117 PVMVWIHGGGFFFGNGNSDFH--FPAKLME-QEVIVVTLNYRLGALGFLSLPEEGIHGNMGLKDQ 178
            ||:::.|||.|...:.||..:  |..:|:. ..|:||:::||..       ||.  .......|.
plant   107 PVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRS-------PEH--RYPCAYDDG 162

  Fly   179 RLALEWVQENIASFNGDPNNVTLF--GESAGGSSVHLHTFARHAKRLFHKAIMQSGTANMEWVFQ 241
            ..||.||:..:...:|..:||.::  |:|:||:..|                             
plant   163 WNALNWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAH----------------------------- 198

  Fly   242 NEAPAKTRRLAELLGG----GDFGGDSKALLTFLQSEK 275
            |.|...|....::||.    ..|||..:.     ||||
plant   199 NVAVRATNEGVKVLGNILLHPMFGGQERT-----QSEK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cltNP_536784.1 alpha/beta hydrolases 22..543 CDD:473884 66/279 (24%)
GID1BNP_191860.1 Abhydrolase_3 109..322 CDD:400284 40/166 (24%)

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