DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clt and Nlg4

DIOPT Version :10

Sequence 1:NP_536784.1 Gene:clt / 117300 FlyBaseID:FBgn0000326 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001369025.1 Gene:Nlg4 / 42402 FlyBaseID:FBgn0083975 Length:1437 Species:Drosophila melanogaster


Alignment Length:756 Identity:171/756 - (22%)
Similarity:252/756 - (33%) Gaps:300/756 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLIFTRFCSSMKVKVPVKQGVLVGRQKKLVNGLE-------YNSFLGVPYAEPPVGELRF---RS 62
            |::.||:                ||...|:..|:       ...|||||||.||..:.||   |:
  Fly    42 RIVQTRY----------------GRLHGLILPLDSFRFLRSVEVFLGVPYATPPTKQNRFSPTRA 90

  Fly    63 PRP-----------------LERFQKQ--ELDCSKEGNVSYQRD--PFTLEVAGSEDCLFLNVYA 106
            |.|                 |...|.:  .|:...:|.:.|.:.  || || ..|||||:|||::
  Fly    91 PAPWDGIRISDKYSPVCPQRLPNIQNETAALEKMPKGRLEYLKRLLPF-LE-NQSEDCLYLNVFS 153

  Fly   107 P-KVKSTRTPLPVMVWIHGGGFFFGNGNSDFHFPAKLMEQ--EVIVVTLNYRLGALGFLSL-PEE 167
            | ...:....|||:|:|||..|.:.:||.   :...::..  ||:|||||||||.||||:. |..
  Fly   154 PVNAGANEKKLPVIVFIHGESFEWSSGNP---YDGSVLASYGEVVVVTLNYRLGILGFLNANPNP 215

  Fly   168 GIH---GNMGLKDQRLALEWVQENIASFNGDPNNVTLFGESAGGSSV-HLHTFARHAKRLFHKAI 228
            ..|   .|.||.||..||.|:|:||..|.||||:|||.|...|.:.: :|.|.....:.|||:||
  Fly   216 HAHARVANYGLMDQMAALHWIQQNIQKFGGDPNSVTLAGHGTGAACINYLMTSPTMVRGLFHRAI 280

  Fly   229 MQSGTANMEWVFQNEAPAKTRRLAELLGGGDFGGDSKALLTFLQSEKATPTAI-LANTLKVLSPD 292
            :.||:|...|                           ||:     |.....|| ||..:....||
  Fly   281 LMSGSAYSSW---------------------------ALV-----EDPVLFAIKLAKEVNCTIPD 313

  Fly   293 ERRRHLPFAFKPVVEDSSSPDRFLEQDIMELMHKK--DCLGSMPVIMGYNSAEGLAIV-VKAKQK 354
            :..||                           |::  |||..:|:       |.|.:. ::|...
  Fly   314 DINRH---------------------------HEQIVDCLRDVPL-------EDLYLADIQAPNF 344

  Fly   355 LEAYEDDLARLVPR----NLVLDP-QAPEAQEAASD----------------------------I 386
            |.::...:..:|.|    ||.:|. .|..::.:::|                            .
  Fly   345 LTSFGPSVDGVVIRPGHSNLDIDDLMARNSRRSSADSGFQSSAGGGGGQGGGAGGGGGGGSGSSF 409

  Fly   387 RAFFFNGQALSKENM-------------------------------------------------- 401
            ...:|.|......||                                                  
  Fly   410 GGGYFGGSGAGTMNMGGHYDVLFGVVTGESIWRFSAHDIQNGFEGERRDKIIRTYVRNAYNYHLN 474

  Fly   402 ------------------------DNLVDLFSDYHFSMDLQRAVEIHA----------------- 425
                                    |..|...||..|...:.||.:|.|                 
  Fly   475 EIFYTIVNEYTDWDRTSQHPINTRDTAVAALSDAQFVAPIVRAGDILAANSPPPVSSSSTAGSPG 539

  Fly   426 ----------SCQTQSPLYFYRLDYVGGRNLYKKIFQNED-----LRGVAHADDICYLF------ 469
                      |.|.....|||..||           |.:|     ..|..|.:|:.|:|      
  Fly   540 ANAAASTSAGSTQPSGRCYFYVFDY-----------QTKDGDYPQRMGTVHGEDLPYIFGAPLVD 593

  Fly   470 QMAGDETEMNRDDLMVTERLCEMWANFARDGKPSPIWK-----PVKKPHNG---------EPIQL 520
            ..:.......:.:..::|.:...|.||||.|.|:...:     ||.|..|.         :|:..
  Fly   594 GFSHFPQNYTKSETALSEAVMIFWTNFARTGNPNEHHRQDSSLPVSKERNRFRSITWENYDPLHQ 658

  Fly   521 DCLLIDRELKMCSNPDGERMDFWRSMYRRYRSENFEAVRAK 561
            ..|.|..:.::.::....::..|..:.........|.|.|:
  Fly   659 KYLEIGMKPRIKNHFRAHQLSIWLRLIPELHRAGMEDVIAR 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cltNP_536784.1 alpha/beta hydrolases 22..543 CDD:473884 164/722 (23%)
Nlg4NP_001369025.1 COesterase 43..681 CDD:395084 166/735 (23%)

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