DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clt and Nlgn1

DIOPT Version :9

Sequence 1:NP_536784.1 Gene:clt / 117300 FlyBaseID:FBgn0000326 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_006535478.1 Gene:Nlgn1 / 192167 MGIID:2179435 Length:863 Species:Mus musculus


Alignment Length:634 Identity:181/634 - (28%)
Similarity:270/634 - (42%) Gaps:147/634 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GRLIFTRFCSSMKVK-----VPVKQGVLVGRQKKLVNGL--EYNSFLGVPYAEPPVGELRFRSPR 64
            |.|:.|....|.|:.     |....|.:.|.:|:|.|.:  ....|||||||.||.||.||:.|.
Mouse    35 GCLLQTFHVLSQKLDDVDPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPE 99

  Fly    65 P------LERFQKQELDCSKEGNVSYQRDP-------FT--LEVAG------SEDCLFLNVYAP- 107
            |      :....:....|.:  |:...|.|       ||  |:|..      |||||:||:|.| 
Mouse   100 PPSPWSDIRNATQFAPVCPQ--NIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPT 162

  Fly   108 ------------------------------------------KVKSTRTPLPVMVWIHGGGFFFG 130
                                                      .::.:..|.||||:||||.:..|
Mouse   163 EDVKRISKECARKPGKKICRKGGPLTKKHTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEG 227

  Fly   131 NGNSDFHFPAKLMEQ--EVIVVTLNYRLGALGFLSLPEEGIHGNMGLKDQRLALEWVQENIASFN 193
            .||.   :...::..  .|||:|:|||||.|||||..::...||.||.|...||.|..|||..|.
Mouse   228 TGNL---YDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFG 289

  Fly   194 GDPNNVTLFGESAGGSSVHLHTFARHA---------KRLFHKAIMQSGTANMEWV--FQNEAPAK 247
            |||..:|:||..||||.|:|.|.:.::         |.||.:||.|||||...|.  ||   |||
Mouse   290 GDPLRITVFGSGAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQ---PAK 351

  Fly   248 TRRLAELLGGGDFGGDSKALLTFLQSEKATPTAILANTLKVLSPDERRRHLPFAFKPVVEDSSSP 312
            ..|:.....|.:. .|:..|:..||.:...         :::..|.:......||.||::....|
Mouse   352 YARILATKVGCNV-SDTVELVECLQKKPYK---------ELVDQDVQPARYHIAFGPVIDGDVIP 406

  Fly   313 DRFLEQDIMELMHKKDCLGSMPVIMGYNSAEGLAIV---VKAKQKLEAYEDDLARLVPRNLVLDP 374
            |     |...||.:.:.| :..:::|.|..|||..|   |.:...:.|.:.|.|   ..|.|.:.
Mouse   407 D-----DPQILMEQGEFL-NYDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFA---VSNFVDNL 462

  Fly   375 QA-PEAQEAASDIRAFFFNGQALSKENMD----NLVDLFSDYHFSMDLQRAVEIHASCQTQSPLY 434
            .. ||.::...:...|.:...| .:.|.:    .|:.||:|:.:........::|::  ..||.|
Mouse   463 YGYPEGKDVLRETIKFMYTDWA-DRHNPETRRKTLLALFTDHQWVAPAVATADLHSN--FGSPTY 524

  Fly   435 FYRLDYVGGRNLYKKIFQNEDLRGVAHADDICYL--FQMAGDETEM-----NRDDLMVTERLCEM 492
            ||...:      :.:..|.......||.|::.|:  ..|.| .||:     :::|:|::..:...
Mouse   525 FYAFYH------HCQTDQVPAWADAAHGDEVPYVLGIPMIG-PTELFPCNFSKNDVMLSAVVMTY 582

  Fly   493 WANFARDGKPS-PIWKPVK----KPHNGEPI------QLDCLLIDRELK 530
            |.|||:.|.|: |:.:..|    ||:..|.:      |.|.|.:...||
Mouse   583 WTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQKDQLYLHIGLK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cltNP_536784.1 COesterase 22..543 CDD:278561 176/614 (29%)
Nlgn1XP_006535478.1 COesterase 53..646 CDD:365897 176/616 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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