DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clt and nlgn1

DIOPT Version :9

Sequence 1:NP_536784.1 Gene:clt / 117300 FlyBaseID:FBgn0000326 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_017949302.2 Gene:nlgn1 / 100329186 XenbaseID:XB-GENE-6041753 Length:859 Species:Xenopus tropicalis


Alignment Length:636 Identity:181/636 - (28%)
Similarity:275/636 - (43%) Gaps:146/636 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GVLVGRQKKLVNGL--EYNSFLGVPYAEPPVGELRFRSPRP------LERFQKQELDCSKEGNVS 83
            |.:.|.:|:|.|.:  ....|||||||.||:||.||:.|.|      ::...:....|.:  |:.
 Frog    60 GKVRGFKKELNNEILGPVVQFLGVPYAAPPIGERRFQPPEPPTMWGDIKNSTQFAPVCPQ--NIV 122

  Fly    84 YQRDP-------FT--LEVAG------SEDCLFLNVYAP-------------------------- 107
            ..|.|       ||  |:|..      |||||:||:|.|                          
 Frog   123 GGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICRKEGPL 187

  Fly   108 -----------------KVKSTRTPLPVMVWIHGGGFFFGNGNSDFHFPAKLMEQ--EVIVVTLN 153
                             .::.:..|.||||:||||.:..|.||.   |...::..  .|||:|:|
 Frog   188 TKKQTDDLGDNEGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNV---FDGSVLASYGNVIVITVN 249

  Fly   154 YRLGALGFLSLPEEGIHGNMGLKDQRLALEWVQENIASFNGDPNNVTLFGESAGGSSVHLHTFAR 218
            ||||.|||||..::...||.||.|...||.|..|||..|.|||..:|:||..||.|.|:|.|.:.
 Frog   250 YRLGVLGFLSTGDQASKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGASCVNLLTLSH 314

  Fly   219 HA---------KRLFHKAIMQSGTANMEWV--FQNEAPAKTRRLAELLGGGDFGGDSKALLTFLQ 272
            ::         |.||.:||.|||||...|.  ||   |||..|:.....|.:. .||..|:..||
 Frog   315 YSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQ---PAKYARILATKVGCNM-SDSGELVECLQ 375

  Fly   273 SEKATPTAILANTLKVLSPDERRRHLPFAFKPVVEDSSSPDRFLEQDIMELMHKKDCLGSMPVIM 337
            .:   |...|.:  :.:.|  .|.|:  ||.||::....||     |...||.:.:.| :..:::
 Frog   376 KK---PYRELVD--QDIQP--VRYHI--AFGPVIDGDVIPD-----DPQVLMEQGEFL-NYDIML 425

  Fly   338 GYNSAEGLAIVVKAKQKLEAYEDDLAR----LVPRNLVLDPQA-PEAQEAASDIRAFFFNGQALS 397
            |.|..|||..|    :....:||.::.    ....|.|.:... .|.::...:...|.:...| .
 Frog   426 GVNQGEGLKFV----ESTVDHEDGVSSSDFDFAVSNFVDNLYGYTEGKDILRETIKFMYTDWA-D 485

  Fly   398 KENMD----NLVDLFSDYHFSMDLQRAVEIHASCQTQSPLYFYRLDYVGGRNLYKKIFQNEDLRG 458
            :.|.:    .|:.||:|:.:........::|::  ..||.|||...:      :.:..|......
 Frog   486 RNNPETRRKTLLALFTDHQWVAPAVATADLHSN--FGSPTYFYAFYH------HCQTDQVPAWAD 542

  Fly   459 VAHADDICYLF--QMAGDETEM-----NRDDLMVTERLCEMWANFARDGKPS-PIWKPVK----K 511
            .:|.|:|.|:|  .|.| .||:     :::|:|::..:...|.|||:.|.|: |:.:..|    |
 Frog   543 ASHGDEIPYVFGIPMIG-PTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTK 606

  Fly   512 PHNGEPI------QLDCLLIDRELK--MCSNPDGERMDFWRSMYRRYRSEN 554
            |:..|.:      |.|.|.:...||  :..:....:::.|..:..|....|
 Frog   607 PNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRATKVNLWLELVPRLHVMN 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cltNP_536784.1 COesterase 22..543 CDD:278561 178/623 (29%)
nlgn1XP_017949302.2 COesterase 52..646 CDD:395084 178/623 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.