DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP2M1 and apm4

DIOPT Version :10

Sequence 1:NP_001298127.1 Gene:AP2M1 / 1173 HGNCID:564 Length:460 Species:Homo sapiens
Sequence 2:NP_592921.1 Gene:apm4 / 2541527 PomBaseID:SPAC31A2.09C Length:446 Species:Schizosaccharomyces pombe


Alignment Length:474 Identity:177/474 - (37%)
Similarity:280/474 - (59%) Gaps:44/474 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     1 MIGGLFIYNHKGEVLISRVYRDDIGSRQAADSAVFSSSGPFPGEWLEANRRNAVDAFRVNVIHAR 65
            ||.||||:|.||:.||.:.:|.|:                         :::..:.|||.:: ..
pombe     1 MISGLFIFNLKGDTLICKTFRHDL-------------------------KKSVTEIFRVAIL-TN 39

Human    66 QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNF 130
            ...|.|:.:|..:::.:.|..::::.|:||.|.|..:|.|||..:...:..||||::|..:|:|.
pombe    40 TDYRHPIVSIGSSTYIYTKHEDLYVVAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKDNV 104

Human   131 VLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQT----KEEQSQI----TSQVTGQIGWR 187
            ..|:|||||::|:|..|.:|..||...::...:|.:...    :...||:    :|::.|.:.||
pombe   105 SFIFELLDEMIDYGIIQTTEPDALARSVSITAVKKKGNALSLKRSHSSQLAHTTSSEIPGSVPWR 169

Human   188 REGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIE-KQG 251
            |.|||||:|.:::|::|.:|||:|..|.||.:.|||.|.|::.|||||||:||:|||:..: ||.
pombe   170 RAGIKYRKNSIYIDIVERMNLLISSTGNVLRSDVSGVVKMRAMLSGMPECQFGLNDKLDFKLKQS 234

Human   252 KGTADETSKSGKQS-----IAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILP 311
            :..:...:.....|     :.::||.|||||||.:|::|..|:|||||||.|||.||:.::|.:|
pombe   235 ESKSKSNNSRNPSSVNGGFVILEDCQFHQCVRLPEFENEHRITFIPPDGEVELMSYRSHENINIP 299

Human   312 FRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAI 376
            ||::|:|.::.:.|:..::.|:::: |..|:..:..|||.|.|.........:|||.|:.|||.|
pombe   300 FRIVPIVEQLSKQKIIYRISIRADY-PHKLSSSLNFRIPVPTNVVKANPRVNRGKAGYEPSENII 363

Human   377 VWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEV-PFAPSGLKVRYLKVFEPKLNYSD 440
            .|||.|..|..|....||:||..|.:::.||:||||::|.: .|..|||.|:||:|.||  :.|.
pombe   364 NWKIPRFLGETELIFYAEVELSNTTNQQIWAKPPISLDFNILMFTSSGLHVQYLRVSEP--SNSK 426

Human   441 HDVIKWVRYIGRSGIYETR 459
            :..||||||..|:|..|.|
pombe   427 YKSIKWVRYSTRAGTCEIR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP2M1NP_001298127.1 AP2_Mu_N 1..165 CDD:341440 48/163 (29%)
AP-2_Mu2_Cterm 193..459 CDD:271159 117/272 (43%)
apm4NP_592921.1 AP2_Mu_N 1..139 CDD:341440 48/163 (29%)
AP-2_Mu2_Cterm 175..445 CDD:271159 117/272 (43%)

Return to query results.
Submit another query.