DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dsp1 and IXR1

DIOPT Version :9

Sequence 1:NP_001138203.1 Gene:Dsp1 / 117294 FlyBaseID:FBgn0278608 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_012893.3 Gene:IXR1 / 853836 SGDID:S000001515 Length:597 Species:Saccharomyces cerevisiae


Alignment Length:528 Identity:136/528 - (25%)
Similarity:196/528 - (37%) Gaps:183/528 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIHQPTIDQQTIQHYQQQLAAQQQQQVQQQQ----------------LQQHQVVVQQ-------- 44
            |::.|...|...|...|  :.|||||.||||                |.|....:||        
Yeast    90 NVYYPLPPQSLTQPTSQ--SQQQQQQQQQQQYANSNSNSNNNVNVNALPQDFGYMQQTGSGQNYP 152

  Fly    45 --NQQQ---------AH--------------------QNSSNTTAGVGTQQLFTYKMASSFPNPA 78
              ||||         :|                    .|::|.::|..:......::|:|..|||
Yeast   153 TINQQQFSEFYNSFLSHLTQKQTNPSVTGTGASSNNNSNNNNVSSGNNSTSSNPAQLAASQLNPA 217

  Fly    79 TTMAQVVATSNAAGTTGY--------DYRLNMAQAAAAAAVPGSQWWYSAANQGQVDANTAA--- 132
            |  |...|.:||||...|        .|..|...|.::...|      |:|.....:||||.   
Yeast   218 T--AAAAAANNAAGPASYLSQLPQVQRYYPNNMNALSSLLDP------SSAGNAAGNANTATHPG 274

  Fly   133 -------------------QLQHQQQQQQQQQQQQQQQHQQQQQ---------MQQQQQQQN--- 166
                               |||.|||||.|||||.|||||.|||         :|||||||.   
Yeast   275 LLPPNLQPQLTHHQQQMQQQLQLQQQQQLQQQQQLQQQHQLQQQQQLQQQHHHLQQQQQQQQHPV 339

  Fly   167 VINSASPMSRVKADAK-----PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTM 226
            |...:|..||::...:     |:...:||..|..:.|.|..::.|:..|  .|.|:..:.|||.:
Yeast   340 VKKLSSTQSRIERRKQLKKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKEL 402

  Fly   227 VDKEKKRFHEMAEKDKQRYEAEMQNY---VPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCND 288
            .|.:||.|:|....:.::|......|   :||              |.|:.|      |..|..:
Yeast   403 TDDQKKPFYEEFRTNWEKYRVVRDAYEKTLPP--------------KRPSGP------FIQFTQE 447

  Fly   289 ERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYE----------------- 336
            .|..|...||:.|:.:|.|.:|.:|.::||..|.:|....::....:|                 
Yeast   448 IRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKKRLKEWESCYPDENDPNGNPTGHS 512

  Fly   337 -----------------REMTEYKTSGKI--------AMSAPSMQASMQAQAQKAALLAAAAQQQ 376
                             ::..|:.|:..|        ..:.|:...|.....|:..|    .|||
Yeast   513 HKAMNMNLNMDTKIMENQDSIEHITANAIDSVTGSNSNSTNPNTPVSPPISLQQQPL----QQQQ 573

  Fly   377 HQQLEEQH 384
            .||.::||
Yeast   574 QQQQQQQH 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dsp1NP_001138203.1 HMG-box 182..252 CDD:294061 19/74 (26%)
HMGB-UBF_HMG-box 275..339 CDD:238686 17/97 (18%)
IXR1NP_012893.3 NHP6B <338..501 CDD:227935 45/184 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I1396
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000133
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100324
Panther 1 1.100 - - O PTHR48112
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X111
TreeFam 00.000 Not matched by this tool.
76.860

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