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Protein Alignment Dsp1 and HMGB4
DIOPT Version :9
Sequence 1: | NP_001138203.1 |
Gene: | Dsp1 / 117294 |
FlyBaseID: | FBgn0278608 |
Length: | 397 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001031364.2 |
Gene: | HMGB4 / 816263 |
AraportID: | AT2G17560 |
Length: | 138 |
Species: | Arabidopsis thaliana |
Alignment Length: | 130 |
Identity: | 39/130 - (30%) |
Similarity: | 61/130 - (46%) |
Gaps: | 14/130 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 262 RGKK--RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNP-EFGVGDIAKELGRKWSDVDPEVKQK 323
||:| :|..||||.|||..||||.|..|.|.:....|| ...|..:.|..|.:|..:..|.|..
plant 20 RGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAP 84
Fly 324 YESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDD 388
|.:.||..|..|.:.:.:| .:.:::.:.:....:...|:.:..|.: ||:.:|||
plant 85 YVAKAESRKTEYIKNVQQY----NLKLASGTNREEDDSDKSKSEVDEAVS-------EEEAEDDD 138
Fly 389 388
plant 139 138
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000133 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100324 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X111 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.710 |
|
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