Protein Alignment Dsp1 and Hmgb4

DIOPT Version :9

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001102933.1
• Gene: Hmgb4 / 685271
• RGDID: 1596426
• Length: 181
• Species: Rattus norvegicus
• Alignment Length: 184
• Identity: 65/184 - (35%)
• Similarity: 103/184 - (55%)
• Gaps: 19/184 - (10%)

  Fly   178 KADAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 242
            |...:|:..:::|.:|:...|.:.|::.|:..:.|.||||:|:|:|:::...||.:|..:|:.||
  Rat     4 KVQLRPKVNVSSYIHFMINFRNKFKEQQPNTYLTFNEFSRRCSEKWRSISKNEKAKFEAIAKLDK 68

  Fly   243 QRYEAEMQNYVPPKGAVVGRGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIA 306
            .||:.||.|||         ||:||:.| ||.||::..|:|..|..|...|:|..||.:.|..:|
  Rat    69 ARYQEEMMNYV---------GKRRKRRKRDPLAPRKPPSSFLLFSLDHFAKLKQENPNWTVVQVA 124

  Fly   307 KELGRKWS---DVDPEVKQKYESMAERDKARYEREMTEYKT---SGKIAMSAPS 354
            |..|:.||   |||   |:.||..|...:|:|.:|...|.:   :.||.:...|
  Rat   125 KAAGKMWSMITDVD---KRPYEQKAAIMRAKYFQEREAYLSQCQNSKINLQGSS 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	24/69 (35%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	24/66 (36%)
Hmgb4	NP_001102933.1	HMGB-UBF_HMG-box	9..75	CDD:238686	22/65 (34%)
		HMG-box	93..158	CDD:238037	25/67 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X111
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	6	5.870