Protein Alignment Dsp1 and tfam

DIOPT Version :10

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001070857.1
• Gene: tfam / 571106
• ZFINID: ZDB-GENE-061013-552
• Length: 277
• Species: Danio rerio
• Alignment Length: 216
• Identity: 49/216 - (22%)
• Similarity: 98/216 - (45%)
• Gaps: 29/216 - (13%)

  Fly   168 INSASPMSRVKADAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKK 232
            |.|.|..:|    ..|:..:|||..||:..:....|::|  ::...:..||.|::||.:..::|:
Zfish    36 IKSFSTATR----GPPKRPLTAYMTFVKDMQPTVSKQNP--SIKSVDVMRKIAQQWKMLTTEQKQ 94

  Fly   233 RFHEMAEKDKQRYEAEMQNY----VPPKGAVVGRGK-----------KRKQIKDPNAPKRSLSAF 282
            .|...:.:.|::|:..::.:    .|.:.|.....|           |:|::.:...|||..|.|
Zfish    95 PFQVASLEAKEQYKLALEKFKAQLTPAESAAFAEEKRQRVAKRKAIRKKKELNNLGKPKRPRSTF 159

  Fly   283 FWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTS-- 345
            ..|..:...:.|....:..:    |.|...|:.:....||.|..:||.||.||:.|:..::..
Zfish   160 NIFMAEHFVEAKGTTTQAKL----KSLRDDWNRLSDTQKQMYIQLAEDDKVRYKNEIKSWEEHMM 220

  Fly   346 --GKIAMSAPSMQASMQAQAQ 364
              |:..:.....:::::|:|:
Zfish   221 EIGREDLLRRKTKSALKAKAK 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box_HMGB_rpt1	182..250	CDD:438794	17/67 (25%)
		HMG-box_NHP6-like	262..342	CDD:438792	23/90 (26%)
tfam	NP_001070857.1	HMG-box_SF	49..107	CDD:438789	15/59 (25%)
		HMG-box_TFAM_rpt2	132..231	CDD:438803	23/102 (23%)