Protein Alignment Dsp1 and hmgb2b

DIOPT Version :9

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_001004674.1
• Gene: hmgb2b / 447936
• ZFINID: ZDB-GENE-040912-122
• Length: 214
• Species: Danio rerio
• Alignment Length: 221
• Identity: 92/221 - (41%)
• Similarity: 139/221 - (62%)
• Gaps: 11/221 - (4%)

  Fly   177 VKADA-KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEK 240
            ||.|. ||:|:.:|||:||||||:|||:|.||..|.|:|||:||:||||::...:|.:|.:||:.
Zfish     2 VKGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKA 66

  Fly   241 DKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDI 305
            ||.||:.||:.||||||.    ||..::.||||||||..||||.||::.|..||:.:|...:|:|
Zfish    67 DKVRYDREMKTYVPPKGV----GKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEI 127

  Fly   306 AKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLA 370
            ||:||..||....:.:..:|..|.:.:.:||:|:..|:..|..:...|........::|
Zfish   128 AKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYRAGGGASKRGPGRPTGSVKKSQ------ 186

  Fly   371 AAAQQQHQQLEEQHDDDDGDGDDDEN 396
            |.|.....:.|::.|::|.:.::||:
Zfish   187 AEADDDDDEDEDEEDEEDDEEEEDED 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	39/69 (57%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	25/63 (40%)
hmgb2b	NP_001004674.1	HMG_box_2	7..78	CDD:286146	39/70 (56%)
		HMG_box	97..164	CDD:278906	26/66 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170583918
Domainoid	1	1.000	74	1.000	Domainoid score	I9073
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	219	1.000	Inparanoid score	I3548
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	1	1.000	-	-		otm24274
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X111
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	9	8.990