Protein Alignment Dsp1 and Ssrp

DIOPT Version :10

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: NP_523830.2
• Gene: Ssrp / 37767
• FlyBaseID: FBgn0010278
• Length: 723
• Species: Drosophila melanogaster
• Alignment Length: 289
• Identity: 63/289 - (21%)
• Similarity: 105/289 - (36%)
• Gaps: 74/289 - (25%)

  Fly   122 NQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQQQQQNVINSASPMSRVKADAKPRGR 186
            |:.:.||..|......:::::........:....:..:..:.:.:|.....  |.|::|:.....
  Fly   445 NENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYD--SNVESDSDDDSD 507

  Fly   187 MTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQN 251
            .:.........:::.:||                        .|||...|...|:|:|.:
  Fly   508 ASGGGGDSDGAKKKKEKK------------------------SEKKEKKEKKHKEKERTK----- 543

  Fly   252 YVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDV 316
                        |..|:.||...|||:.:||..:.||.|..:|..||...|.:|||:.|..|.::
  Fly   544 ------------KPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL 596

  Fly   317 DPEVKQKYESMAERDKARYEREMTEYK----------TSGKIAMS-----APSMQASMQAQAQKA 366
              :.|.|:|..|.:||.||..||..||          ..||.:..     :||.:|:......|:
  Fly   597 --KDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSGSGFKS 659

  Fly   367 ALLAAAAQQQHQQLEEQHDDDDGDGDDDE 395
                          :|...|||....|||
  Fly   660 --------------KEYISDDDSTSSDDE 674

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box_HMGB_rpt1	182..250	CDD:438794	9/67 (13%)
		HMG-box_NHP6-like	262..342	CDD:438792	31/79 (39%)
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	6/55 (11%)
		HMG-box_SSRP1-like	557..621	CDD:438810	25/65 (38%)