Protein Alignment Dsp1 and Hmg20b

DIOPT Version :9

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: XP_006241006.1
• Gene: Hmg20b / 362825
• RGDID: 1309235
• Length: 344
• Species: Rattus norvegicus
• Alignment Length: 190
• Identity: 48/190 - (25%)
• Similarity: 80/190 - (42%)
• Gaps: 38/190 - (20%)

  Fly   227 VDKEKKRFHEMAEKDKQRYEAEMQNYVP-------------------------PKGAVVGRGKKR 266
            |.:|:.......||..|..||..:.:.|                         ||      ||||
  Rat    30 VKQERSEGPRAGEKGPQEEEARPRPHAPDPAHSSQSPSQGHSPLLQPVKKRGWPK------GKKR 88

  Fly   267 KQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERD 331
            |:|. ||.||..::.:..|.|:.|.:::..:|:....:|.|.||.:||.:.|..||:|...||::
  Rat    89 KKIL-PNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKE 152

  Fly   332 KARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDG 391
            |.:|.:|:..|:.|....:....:|.:...:...::.|.......|:.:      |.|||
  Rat   153 KQQYLKELWAYQQSEAYKVCTEKIQENKIKKEDSSSGLMNTLLNGHKGV------DCGDG 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	7/24 (29%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	20/63 (32%)
Hmg20b	XP_006241006.1	NHP6B	26..229	CDD:227935	48/190 (25%)
		HMGB-UBF_HMG-box	96..160	CDD:238686	20/63 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900