DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dsp1 and Tox

DIOPT Version :10

Sequence 1:NP_001138203.1 Gene:Dsp1 / 117294 FlyBaseID:FBgn0278608 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_063143968.1 Gene:Tox / 362481 RGDID:1310455 Length:527 Species:Rattus norvegicus


Alignment Length:330 Identity:75/330 - (22%)
Similarity:116/330 - (35%) Gaps:88/330 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 VATSNAAGTTGYDYRLNMAQAAAAAAVPGSQWWYSAANQGQVDANTAAQLQHQQQQQQQQQQQQQ 149
            :..||..|..|.....:::.........|:|  ||:..|       .|.::.:.|....:||...
  Rat   120 ITVSNMLGQDGTLLSNSISVMQEIGNAEGAQ--YSSHPQ-------LAAMRPRGQPTDLRQQASM 175

  Fly   150 QQHQQQQQMQQQQQQQNV----------INSASPMSRVKADAKPRGRMTAYAYFVQTCREEHKKK 204
            .||.|...:.|.|....:          .||.||.....|...|...:                 
  Rat   176 MQHGQLTTINQSQLSAQLGLNMGGTNVPHNSPSPPGSKSATPSPSSSV----------------- 223

  Fly   205 HPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQI 269
            |.||          |.:..| :...||:...:|.:|.|           .||       ||:|  
  Rat   224 HEDE----------CEDTSK-INGGEKRPASDMGKKPK-----------TPK-------KKKK-- 257

  Fly   270 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKAR 334
            ||||.|::.:||:..|..|.:..:|..||....|:::|.:...|..:..|.||.|:...|..|..
  Rat   258 KDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKE 322

  Fly   335 YEREMTEYKTS-----------------GKIAMSAPSMQASMQAQAQKAALLAAAAQQQ---HQQ 379
            |.:::..|:.|                 .::..|.||:... .:||..|..|::...||   ..|
  Rat   323 YLKQLAAYRASLVSKSYNDPVDVKTSQPPQLVNSKPSVFHG-PSQAHSALYLSSHYHQQPGMTPQ 386

  Fly   380 LEEQH 384
            |...|
  Rat   387 LTAMH 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dsp1NP_001138203.1 HMG-box_HMGB_rpt1 182..250 CDD:438794 11/67 (16%)
HMG-box_NHP6-like 262..342 CDD:438792 25/79 (32%)
ToxXP_063143968.1 None

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