DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dsp1 and CG32202

DIOPT Version :9

Sequence 1:NP_001138203.1 Gene:Dsp1 / 117294 FlyBaseID:FBgn0278608 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_730354.2 Gene:CG32202 / 326199 FlyBaseID:FBgn0052202 Length:141 Species:Drosophila melanogaster


Alignment Length:149 Identity:31/149 - (20%)
Similarity:54/149 - (36%) Gaps:41/149 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 MVDKEKKRFHEMAEK--DK-QRYEAEMQNYVPPKGAVVGRGKK--RKQIKDPNAPKRSLSAFFWF 285
            :::|::..:.::.||  |: ||.:||.:..|.....:    ||  |::..|....||.|.     
  Fly     2 LLNKKELMYKQLVEKLYDRCQRIQAENERCVMRVNGI----KKIVRRRNHDVELLKRRLD----- 57

  Fly   286 CNDERNKVKALNPEFGVGDIAKELGRKWSDVD---PEVKQKYESMAERDKARYEREMTEYKTSGK 347
                                  :.|..|..|.   |..|.|.|......|.:.::...|....| 
  Fly    58 ----------------------KHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNKQAADETGAPG- 99

  Fly   348 IAMSAPSMQASMQAQAQKA 366
             :...|:..|:.:.:.|||
  Fly   100 -SEPGPNTPAARKPRKQKA 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dsp1NP_001138203.1 HMG-box 182..252 CDD:294061 8/28 (29%)
HMGB-UBF_HMG-box 275..339 CDD:238686 11/66 (17%)
CG32202NP_730354.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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