Protein Alignment Dsp1 and Hmgb1

DIOPT Version :9

• Sequence 1: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Sequence 2: XP_038945039.1
• Gene: Hmgb1 / 25459
• RGDID: 2802
• Length: 486
• Species: Rattus norvegicus
• Alignment Length: 352
• Identity: 126/352 - (35%)
• Similarity: 196/352 - (55%)
• Gaps: 24/352 - (6%)

  Fly    53 SSNTTAGVGTQQLFTYKMASSF--PNPATTMAQVVATSNAAGTTGYD-YRLNMAQAAAAAAVPGS 114
            ||:|.....|   :|:..|.:.  ..|.:..|:........|..|.| .|...|.|.|||.....
  Rat   150 SSHTHIHTHT---YTHSHARTHKGKEPYSRRARPRGGGGGGGAGGEDAQRPFRAPALAAAGGASP 211

  Fly   115 QWWYSAANQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQ-----QQQQQNVINSASPM 174
            .:......:|:.:....|.|:...:..:.:.:.:.|......|:::     :.:|:|.:|..
  Rat   212 HFERGFLRRGRQNGGGGASLRPSGRTWRPRARPEPQPPSTSGQVRRAGNPPRARQENQLNMG--- 273

  Fly   175 SRVKAD-AKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMA 238
               |.| .||||:|::||:|||||||||||||||.:|.|:|||:||:||||||..|||.:|.:||
  Rat   274 ---KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 335

  Fly   239 EKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVG 303
            :.||.|||.||:.|:|||      |:.:|:.||||||||..||||.||::.|.|:|..:|...:|
  Rat   336 KADKARYEREMKTYIPPK------GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 394

  Fly   304 DIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAAL 368
            |:||:||..|::...:.||.||..|.:.|.:||:::..|:..||...:...:..:.:::.:|...
  Rat   395 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 459

  Fly   369 LAAAAQQQHQQLEEQHDDDDGDGDDDE 395
            .....::..::.||:.|:|:.:.||||
  Rat   460 DDEEDEEDEEEEEEEEDEDEEEDDDDE 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	48/69 (70%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	28/63 (44%)
Hmgb1	XP_038945039.1	HMG_box_2	277..349	CDD:401091	48/71 (68%)
		HMG_box	366..433	CDD:395407	28/66 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	116	1.000	Domainoid score	I5799
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	213	1.000	Inparanoid score	I3551
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	1	1.000	-	-		otm45117
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	1	1.100	-	-	LDO	PTHR48112
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X111
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	8.960